RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 USP4Q13107 963 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 CDC42BPAQ5VT25 1732 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 CAPN13Q6MZZ7 669 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 TAPT1Q6NXT6 567 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 SV2AQ7L0J3 742 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 SNX20Q7Z614 316 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 LEMD2Q8NC56 503 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 CAPSLQ8WWF8 208 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ASZ1Q8WWH4 475 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF354BQ96LW1 612 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MIR1-1HGQ9H1L0 117 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 NEUROD4Q9HD90 331 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 GGT7Q9UJ14 662 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 SPHKAPQ2M3C7 1700 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 DIP2AQ14689 1571 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 A0A096LPK6 155 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MDM4O15151 490 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 TLX3O43711 291 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 CHP2O43745 196 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 VAPBO95292 243 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 BCL10O95999 233 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 GYPCP04921 128 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ATP6V1B1P15313 513 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 BNIP2Q12982 314 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 PRAMEF18Q5VWM3 479 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF549Q6P9A3 640 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 EIF3MQ7L2H7 374 aaKnown RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 DNAJB7Q7Z6W7 309 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 SIRT2Q8IXJ6 389 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 PSMA8Q8TAA3 256 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF473Q8WTR7 871 aaKnown RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 RASSF5Q8WWW0 418 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 AGO4Q9HCK5 861 aaKnown RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 PHTF1Q9UMS5 762 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 SNAP23O00161 211 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 KCNH1O95259 989 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 VTNP04004 478 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 PRKAR2AP13861 404 aaKnown RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ACLYP53396 1101 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 EPC2Q52LR7 807 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MFSD7Q6UXD7 560 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 DNAJC14Q6Y2X3 702 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 RTL4Q6ZR62 310 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 CHSY3Q70JA7 882 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 CHST15Q7LFX5 561 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 POLNQ7Z5Q5 900 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MAP4K3Q8IVH8 894 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MCOLN2Q8IZK6 566 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MSL3Q8N5Y2 521 aaKnown RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 COLGALT1Q8NBJ5 622 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 MDM1Q8TC05 714 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 TEFMQ96QE5 360 aaKnown RBP4.11□□□□□ -1.75
SCN3A-201ENST00000283254 ADAM2Q99965 735 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 PCBD2Q9H0N5 130 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 DNAJC16Q9Y2G8 782 aa4.11□□□□□ -1.75
SCN3A-201ENST00000283254 LMTK2Q8IWU2 1503 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RBM47A0AV96 593 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 WASHC1A8K0Z3 465 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 WASH3PC4AMC7 463 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PHGDHO43175 533 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TIPRLO75663 272 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RECQL4O94761 1208 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 UBA1P22314 1058 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DCKP27707 260 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ASMTP46597 345 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FASTKQ14296 549 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CBX2Q14781 532 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SPDYCQ5MJ68 293 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 WASH2PQ6VEQ5 465 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 OR8H2Q8N162 312 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SMAD5Q99717 465 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 FBXO28Q9NVF7 368 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DMGDHQ9UI17 866 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PPIEQ9UNP9 301 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 HEBP2Q9Y5Z4 205 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ATXN2Q99700 1313 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DISP2A7MBM2 1401 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 BCORL1Q5H9F3 1711 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 E2F8A0AVK6 867 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TEX46H3BTG2 121 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CHADO15335 359 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SNAP91O60641 907 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ATG13O75143 517 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 SIN3BO75182 1162 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 IL1BP01584 269 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 PTPN1P18031 435 aaKnown RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 BUD31P41223 144 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CCZ1BP86790 482 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 CCZ1P86791 482 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 HSPA14Q0VDF9 509 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 AAK1Q2M2I8 961 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 DEFB115Q30KQ5 88 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 MPPE1Q53F39 396 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF57Q68EA5 555 aaPredicted RBP4.1□□□□□ -1.75
SCN3A-201ENST00000283254 RINLQ6ZS11 566 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF621Q6ZSS3 439 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 STOX1Q6ZVD7 989 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 UNC5BQ8IZJ1 945 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 TEX47Q8TBZ9 253 aa4.1□□□□□ -1.75
SCN3A-201ENST00000283254 ACOT12Q8WYK0 555 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms