RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PIGBQ92521 554 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 IFT46Q9NQC8 304 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 SPG21Q9NZD8 308 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 SNX7Q9UNH6 387 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 TNFSF13BQ9Y275 285 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 CATP04040 527 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 DNAJB2P25686 324 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 MARSP56192 900 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 DEF8Q6ZN54 512 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 TMC7Q7Z402 723 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 AMIGO1Q86WK6 493 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 OR10H5Q8NGA6 315 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 LENG9Q96B70 501 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 MXRA8Q9BRK3 442 aa8.82□□□□□ -1
NIPBL-201ENST00000282516 UNKQ9C0B0 810 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 SAMHD1Q9Y3Z3 626 aaKnown RBP8.82□□□□□ -1
NIPBL-201ENST00000282516 GSG1L2A8MUP6 293 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 XKRYO14609 159 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 THP07101 528 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ERCC2P18074 760 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PPIBP23284 216 aaKnown RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 CYP4F2P78329 520 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 CYP4F3Q08477 520 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 RAPSNQ13702 412 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 TBC1D25Q3MII6 688 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 RAD9BQ6WBX8 426 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ZDHHC17Q8IUH5 632 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 SEMA4DQ92854 862 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 KCNH7Q9NS40 1196 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 NEO1Q92859 1461 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 LRIG2O94898 1065 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ENDOD1O94919 500 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 MLYCDO95822 493 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 SERPINA4P29622 427 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 RPL5P46777 297 aaKnown RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 PTENP60484 403 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ZBTB6Q15916 424 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 LYPLAL1Q5VWZ2 237 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 TRIM40Q6P9F5 258 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 BORCS5Q969J3 196 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 KCNS3Q9BQ31 491 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ACE2Q9BYF1 805 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 SLC6A15Q9H2J7 730 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 CCDC167Q9P0B6 97 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 UXTQ9UBK9 157 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 TUBE1Q9UJT0 475 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 C2CD2Q9Y426 696 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 A0A096LPK6 155 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 TRIM64A6NGJ6 449 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PCP4L1A6NKN8 68 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 OR10H3O60404 316 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 NDUFB10O96000 172 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 OR1E1P30953 314 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 NAMPTP43490 491 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 DPYSQ14117 519 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ATG9AQ7Z3C6 839 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 TRAPPC5Q8IUR0 188 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 OGDHLQ9ULD0 1010 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 GNEQ9Y223 722 aaKnown RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 SUV39H1O43463 412 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 NR2F1P10589 423 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 RPA1P27694 616 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 FCGRTP55899 365 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 IL18Q14116 193 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 MPP2Q14168 576 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PFKFB4Q16877 469 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 RFTN2Q52LD8 501 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 LZTR1Q8N653 840 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 HTR3CQ8WXA8 447 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PLEKHA1Q9HB21 404 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 MAT2BQ9NZL9 334 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ADAM28Q9UKQ2 775 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PRDM15P57071 1507 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 ZNF608Q9ULD9 1512 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 RPA3P35244 121 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 IGFALSP35858 605 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 TCF7P36402 384 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 MMP13P45452 471 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 CDKL1Q00532 357 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 INSCQ1MX18 579 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 POTEHQ6S545 545 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ACTL9Q8TC94 416 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 FAR1Q8WVX9 515 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 COL26A1Q96A83 441 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PPP3R2Q96LZ3 170 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 TEFMQ96QE5 360 aaKnown RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 DNPEPQ9ULA0 475 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PLOD2O00469 737 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 FGF10O15520 208 aaPredicted RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 PRLRP16471 622 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 GRIA3P42263 894 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PPP2R2BQ00005 443 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 ENPEPQ07075 957 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 KCNA10Q16322 511 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 DHDDSQ86SQ9 333 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 FBXO30Q8TB52 745 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 PTCD3Q96EY7 689 aaKnown RBP8.81□□□□□ -1
NIPBL-201ENST00000282516 SLC47A1Q96FL8 570 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 DCLK3Q9C098 648 aa8.81□□□□□ -1
NIPBL-201ENST00000282516 INTS10Q9NVR2 710 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms