RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 RHOCP08134 193 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CCDC166P0CW27 439 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TEDDM1Q5T9Z0 273 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TRNP1Q6NT89 227 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 MRNIPQ6NTE8 343 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ANKLE1Q8NAG6 615 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 GANCQ8TET4 914 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ALG9Q9H6U8 611 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ADAMTS5Q9UNA0 930 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 MAGEC1O60732 1142 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 PSMC3P17980 439 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ITGB6P18564 788 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TFEBP19484 476 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 EDNRBP24530 442 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 PBX3P40426 434 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CXCR3P49682 368 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TUSC3Q13454 348 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ZNF792Q3KQV3 632 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 AGAP9Q5VTM2 703 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 UPF1Q92900 1129 aaKnown RBP eCLIP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 C16orf70Q9BSU1 422 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CCDC90BQ9GZT6 254 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ING2Q9H160 280 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 KIAA0100Q14667 2235 aaKnown RBP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 KNL1Q8NG31 2342 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 LINGO3P0C6S8 592 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 NNMTP40261 264 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CD86P42081 329 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 ACTR3P61158 418 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 STX5Q13190 355 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 CRHR2Q13324 411 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 FASTKQ14296 549 aaKnown RBP20.07■□□□□ 0.8
CSPG5-201ENST00000264723 NEPROQ6NW34 567 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 TAPT1Q6NXT6 567 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 GK5Q6ZS86 529 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 SLC35F5Q8WV83 523 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 PIGVQ9NUD9 493 aa20.07■□□□□ 0.8
CSPG5-201ENST00000264723 DUSP11O75319 330 aaKnown RBP20.06■□□□□ 0.8
CSPG5-201ENST00000264723 AKT1P31749 480 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ZBTB49Q6ZSB9 765 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 OR52K2Q8NGK3 314 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ACMSDQ8TDX5 336 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 PBXIP1Q96AQ6 731 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 SLC4A5Q9BY07 1137 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 CXCL16Q9H2A7 254 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 KANSL3Q9P2N6 904 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 FETUBQ9UGM5 382 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ANKRD12Q6UB98 2062 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ARHGAP10A1A4S6 786 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 TMEM233B4DJY2 109 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 VCLP18206 1134 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 GRK4P32298 578 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 RAD51Q06609 339 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 CFAP52Q8N1V2 620 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 LPCAT1Q8NF37 534 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 TMEM79Q9BSE2 394 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ATP13A1Q9HD20 1204 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 DERAQ9Y315 318 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ZNF711Q9Y462 761 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 BAIAP3O94812 1187 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ALDOAP04075 364 aaKnown RBP20.06■□□□□ 0.8
CSPG5-201ENST00000264723 APOA4P06727 396 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 SERPINF2P08697 491 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 CHRNA4P43681 627 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 CDK7P50613 346 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ENPEPQ07075 957 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 ESRP1Q6NXG1 681 aaKnown RBP20.06■□□□□ 0.8
CSPG5-201ENST00000264723 NCLNQ969V3 563 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 PTCD3Q96EY7 689 aaKnown RBP20.06■□□□□ 0.8
CSPG5-201ENST00000264723 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 GIT1Q9Y2X7 761 aa20.06■□□□□ 0.8
CSPG5-201ENST00000264723 RGSL1A5PLK6 1076 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 TRPC5OSA6NMA1 111 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 DAB1O75553 588 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 SOAT2O75908 522 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 LRIG2O94898 1065 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 ALDH1A1P00352 501 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 IL10P22301 178 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 PSMD5Q16401 504 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 TIGD5Q53EQ6 642 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 SDCCAG3Q96C92 435 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 TBL1YQ9BQ87 522 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 WDR83Q9BRX9 315 aaKnown RBP20.05■□□□□ 0.8
CSPG5-201ENST00000264723 UBE2OQ9C0C9 1292 aaKnown RBP20.05■□□□□ 0.8
CSPG5-201ENST00000264723 RPL26L1Q9UNX3 145 aaKnown RBP20.05■□□□□ 0.8
CSPG5-201ENST00000264723 FAM159BA6NKW6 160 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 PAGE1O75459 146 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 PRKCZQ05513 592 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 MAPRE2Q15555 327 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 DPYSL2Q16555 572 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 PITRM1Q5JRX3 1037 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 TMEM110Q86TL2 294 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 FBXW8Q8N3Y1 598 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 DCUN1D5Q9BTE7 237 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 C20orf27Q9GZN8 174 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 IL22Q9GZX6 179 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 SDK1Q7Z5N4 2213 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 DPYSL4O14531 572 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 CYBBP04839 570 aa20.05■□□□□ 0.8
CSPG5-201ENST00000264723 LSM12Q3MHD2 195 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms