RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SYNDIG1LA6NDD5 238 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 CYP2A6P11509 494 aaPredicted RBP16.9■□□□□ 0.3
PHRF1-201ENST00000264555 LMO2P25791 158 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 SQLEQ14534 574 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 ALYREFQ86V81 257 aaKnown RBP16.9■□□□□ 0.3
PHRF1-201ENST00000264555 PCED1BQ96HM7 432 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 GBA3Q9H227 469 aa16.9■□□□□ 0.3
PHRF1-201ENST00000264555 GNG14A0A1W2PPG7 69 aa16.89■□□□□ 0.3
PHRF1-201ENST00000264555 L1CAMP32004 1257 aa16.89■□□□□ 0.3
PHRF1-201ENST00000264555 GDF10P55107 478 aa16.89■□□□□ 0.3
PHRF1-201ENST00000264555 UBAP2LQ14157 1087 aaKnown RBP16.89■□□□□ 0.3
PHRF1-201ENST00000264555 USP45Q70EL2 814 aa16.89■□□□□ 0.3
PHRF1-201ENST00000264555 RP9Q8TA86 221 aaKnown RBP16.89■□□□□ 0.3
PHRF1-201ENST00000264555 SLC35B2Q8TB61 432 aa16.89■□□□□ 0.3
PHRF1-201ENST00000264555 DQX1Q8TE96 717 aaKnown RBP16.89■□□□□ 0.3
PHRF1-201ENST00000264555 SLC9A7Q96T83 725 aa16.89■□□□□ 0.3
PHRF1-201ENST00000264555 SENP6Q9GZR1 1112 aaPredicted RBP16.89■□□□□ 0.3
PHRF1-201ENST00000264555 LYPLA1O75608 230 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 TGDSO95455 350 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 ALOX15P16050 662 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 FAM98BQ52LJ0 330 aaKnown RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 DIS3LQ8TF46 1054 aaKnown RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 OSCP1Q8WVF1 389 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 OPTCQ9UBM4 332 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 AP4S1Q9Y587 144 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 MSI1O43347 362 aaKnown RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 RGS14O43566 566 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 SEC22BO75396 215 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 TCEA3O75764 348 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 STAU1O95793 577 aaKnown RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 FAM58BPP0C7Q3 252 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 ATP6V1B2P21281 511 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 CCNCP24863 283 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 IYDQ6PHW0 289 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 ADCK1Q86TW2 530 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PTCD2Q8WV60 388 aaKnown RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 ATG7O95352 703 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 HDCP19113 662 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 ZBTB17Q13105 803 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 IRGCQ6NXR0 463 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 GPR141Q7Z602 305 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PYROXD2Q8N2H3 581 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 HDAC10Q969S8 669 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 C7orf26Q96N11 449 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 CDH19Q9H159 772 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 LRMDAQ9H2I8 198 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 FZD10Q9ULW2 581 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 ARL5CA6NH57 179 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 SLC5A3P53794 718 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PKNOX1P55347 436 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 BOP1Q14137 746 aaKnown RBP16.89■□□□□ 0.29
PHRF1-201ENST00000264555 TCEAL1Q15170 157 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PLD3Q8IV08 490 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PGBD3Q8N328 593 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 PYDC1Q8WXC3 89 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
PHRF1-201ENST00000264555 INPP4BO15327 924 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CPSF4O95639 269 aaKnown RBP16.88■□□□□ 0.29
PHRF1-201ENST00000264555 C2P06681 752 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CFHP08603 1231 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 PCNAP12004 261 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 VCLP18206 1134 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 NEK3P51956 506 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CNTN1Q12860 1018 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 PSMD5Q16401 504 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 TEPSINQ96N21 525 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 TMEM79Q9BSE2 394 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 BDH2Q9BUT1 245 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CAB39LQ9H9S4 337 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 SPG21Q9NZD8 308 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 HMGXB4Q9UGU5 601 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 ZMYM5Q9UJ78 669 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 ENTPD5O75356 428 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 MLYCDO95822 493 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 ASGR1P07306 291 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 ABL2P42684 1182 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CCDC149Q6ZUS6 474 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 ZNF567Q8N184 647 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CMASQ8NFW8 434 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-201ENST00000264555 ZCCHC2Q9C0B9 1178 aaKnown RBP16.88■□□□□ 0.29
PHRF1-201ENST00000264555 PIF1Q9H611 641 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 SAC3D1A6NKF1 404 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 FOXO6A8MYZ6 492 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 COL6A2P12110 1019 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 POLD2P49005 469 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 SOWAHAQ2M3V2 549 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 IL27RAQ6UWB1 636 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 CLNKQ7Z7G1 428 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 LMO3Q8TAP4 145 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 TTPALQ9BTX7 342 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 F8W810 466 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 XYLBO75191 536 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 LRPAP1P30533 357 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 DAOAP59103 153 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 OASLQ15646 514 aaKnown RBP16.88■□□□□ 0.29
PHRF1-201ENST00000264555 DPYSL2Q16555 572 aa16.88■□□□□ 0.29
PHRF1-201ENST00000264555 PREPLQ4J6C6 727 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms