RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 GSTT1P30711 240 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 ALDH9A1P49189 494 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 PRKG2Q13237 762 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 ATP1A4Q13733 1029 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
CD44-201ENST00000263398 PPP1R26Q5T8A7 1209 aaPredicted RBP10.87□□□□□ -0.67
CD44-201ENST00000263398 CASP12Q6UXS9 341 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 CYP4Z2PQ8N1L4 340 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 TSPAN14Q8NG11 270 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 SELENOMQ8WWX9 145 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 REPS1Q96D71 796 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 SERAC1Q96JX3 654 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 OMDQ99983 421 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 C2orf49Q9BVC5 232 aaPredicted RBP10.87□□□□□ -0.67
CD44-201ENST00000263398 ZYG11BQ9C0D3 744 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 OSGEPL1Q9H4B0 414 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 REEP1Q9H902 201 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
CD44-201ENST00000263398 ADAM30Q9UKF2 790 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 PACSIN3Q9UKS6 424 aa10.87□□□□□ -0.67
CD44-201ENST00000263398 MRPL42Q9Y6G3 142 aaKnown RBP10.87□□□□□ -0.67
CD44-201ENST00000263398 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 DYTNA2CJ06 578 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 FGFR3P22607 806 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TM4SF1P30408 202 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 PPIL2Q13356 520 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 ABHD15Q6UXT9 468 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 SYT12Q8IV01 421 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 RCN3Q96D15 328 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TPD52L3Q96J77 140 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 MECRQ9BV79 373 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 CAPN10Q9HC96 672 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 COG5Q9UP83 839 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 PRR5-ARHGAP8B1AHC4 643 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 IRF6O14896 467 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 EPN2O95208 641 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 KCNH1O95259 989 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 SERPINA4P29622 427 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 WEE1P30291 646 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TTPAP49638 278 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 PSEN1P49768 467 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 AIF1P55008 147 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 JAM2P57087 298 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 ARHGAP8P85298 464 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 INAQ16352 499 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 LCLAT1Q6UWP7 414 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 ALYREFQ86V81 257 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 C10orf107Q8IVU9 208 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 C10orf53Q8N6V4 93 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 SEMA3CQ99985 751 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TRMOQ9BU70 441 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 RHOJQ9H4E5 214 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 HMG20AQ9NP66 347 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TMEM216Q9P0N5 145 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 PLLPQ9Y342 182 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 SNX8Q9Y5X2 465 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 BUD23O43709 281 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 CCNE2O96020 404 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 HGFP14210 728 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 TCF3P15923 654 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 ARF4P18085 180 aaPredicted RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 ADARP55265 1226 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 RAB14P61106 215 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 IRF8Q02556 426 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TNK2Q07912 1038 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 PTPRNQ16849 979 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 INSCQ1MX18 579 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 SPANXN2Q5MJ10 180 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 MAP1SQ66K74 1059 aaPredicted RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 FAM13CQ8NE31 585 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 C19orf18Q8NEA5 215 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 MRPL48Q96GC5 212 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 MARK4Q96L34 752 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TEKT5Q96M29 485 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 CPXM1Q96SM3 734 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 MLPHQ9BV36 600 aaPredicted RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 DHX33Q9H6R0 707 aaKnown RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 ARHGAP28Q9P2N2 729 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 MED1Q15648 1581 aaPredicted RBP10.86□□□□□ -0.67
CD44-201ENST00000263398 KIF1AQ12756 1690 aa10.86□□□□□ -0.67
CD44-201ENST00000263398 TCRBV7S2A1N4TA0A589 114 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 LRCH4O75427 683 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 C2P06681 752 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 BNIP2Q12982 314 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 CTBP1Q13363 440 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 MAPKAPK3Q16644 382 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 RAP1GAP2Q684P5 730 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 CLYBLQ8N0X4 340 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 FBXO30Q8TB52 745 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 RNFT2Q96EX2 444 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 PPP3R2Q96LZ3 170 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 RAD21L1Q9H4I0 556 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 C3orf18Q9UK00 162 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 FZD1Q9UP38 647 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 GSC2O15499 205 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 PGM3O95394 542 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 TPSB2P20231 275 aa10.85□□□□□ -0.67
CD44-201ENST00000263398 PTPN3P26045 913 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms