RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 ATP8A1Q9Y2Q0 1164 aa16.86■□□□□ 0.29
CHCHD3-201ENST00000262570 CACNA1IQ9P0X4 2223 aa16.86■□□□□ 0.29
CHCHD3-201ENST00000262570 SHROOM3Q8TF72 1996 aa16.86■□□□□ 0.29
CHCHD3-201ENST00000262570 KCNN4O15554 427 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ZNF189O75820 626 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 NEBLO76041 1014 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 HLA-DQB2P05538 268 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 CTSLP07711 333 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 GABRG2P18507 467 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 NDUFV2P19404 249 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 HOXA6P31267 233 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 CHRNA3P32297 505 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 SCNN1BP51168 640 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 MAXP61244 160 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 SNX1Q13596 522 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 RASSF3Q86WH2 238 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 RYBPQ8N488 228 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 TMIEQ8NEW7 156 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 OR6K2Q8NGY2 324 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 MRGPRX1Q96LB2 322 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 TEKT5Q96M29 485 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 LRFN3Q9BTN0 628 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 POLR1EQ9GZS1 481 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 HAUS2Q9NVX0 235 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 EVLQ9UI08 416 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 DRG1Q9Y295 367 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 WASF2Q9Y6W5 498 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 CFAP69A5D8W1 941 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 RNF103O00237 685 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 PDE2AO00408 941 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 KRIT1O00522 736 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ZBTB24O43167 697 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 RNASEH1O60930 286 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 GJB3O75712 270 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ALDH1A2O94788 518 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 APBB3O95704 486 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ITGAVP06756 1048 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 STIP1P31948 543 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 GKP32189 559 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 NRLP54845 237 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 RAD51Q06609 339 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 CYP1B1Q16678 543 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ANO7Q6IWH7 933 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 DSG4Q86SJ6 1040 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 SRLQ86TD4 932 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 MMAAQ8IVH4 418 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ZNF567Q8N184 647 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 C12orf50Q8NA57 414 aaPredicted RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 MDGA1Q8NFP4 955 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 HMGB4Q8WW32 186 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ZNF592Q92610 1267 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 LRIG1Q96JA1 1093 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 AGAP3Q96P47 875 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 NUDCD1Q96RS6 583 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 CPEB1Q9BZB8 566 aaKnown RBP16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 EBF1Q9UH73 591 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 IL36AQ9UHA7 158 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 TRHDEQ9UKU6 1024 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 SARDHQ9UL12 918 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 ZNF148Q9UQR1 794 aa16.85■□□□□ 0.29
CHCHD3-201ENST00000262570 TTC24A2A3L6 582 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 INSIG1O15503 277 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 LEFTY1O75610 366 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 PRNPP04156 253 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 TDGF1P13385 188 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 CES1P23141 567 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 PAFAH1B1P43034 410 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 MAPK8P45983 427 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 NUBP1P53384 320 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 GDF10P55107 478 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 RPS14P62263 151 aaKnown RBP16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 ARSIQ5FYB1 569 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 RALGPS1Q5JS13 557 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 ZNF776Q68DI1 518 aaPredicted RBP16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 FAM71DQ8N9W8 422 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 ARRDC2Q8TBH0 407 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 SIPA1Q96FS4 1042 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 NSMCE3Q96MG7 304 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 SEMA3CQ99985 751 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 SLC6A17Q9H1V8 727 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 ZDHHC6Q9H6R6 413 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 NOD2Q9HC29 1040 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 TTLL3Q9Y4R7 772 aa16.84■□□□□ 0.29
CHCHD3-201ENST00000262570 GOLGA6L10A0A0M3HER8 536 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 C5orf60A6NFR6 353 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 ESPNB1AK53 854 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 ZNF500O60304 480 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 IL1BP01584 269 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 CD68P34810 354 aaPredicted RBP16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 KCNJ1P48048 391 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 AP1S1P61966 158 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 ZBTB16Q05516 673 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 ITKQ08881 620 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 NIPAL4Q0D2K0 466 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 GRM3Q14832 879 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 CST6Q15828 149 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 NCEH1Q6PIU2 408 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 TSSK4Q6SA08 328 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 PID1Q7Z2X4 250 aa16.83■□□□□ 0.28
CHCHD3-201ENST00000262570 KIF18AQ8NI77 898 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms