RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LRRC40Q9H9A6 602 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 NRBP2Q9NSY0 501 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 RIPK3Q9Y572 518 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 U3KQV3 271 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 DAB1O75553 588 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 BAG6P46379 1132 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 SULT1E1P49888 294 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 C6orf10Q5SRN2 563 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 DNAJC14Q6Y2X3 702 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 SLCO6A1Q86UG4 719 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 DENND6AQ8IWF6 608 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 FSTL5Q8N475 847 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 NCLNQ969V3 563 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 EHD1Q9H4M9 534 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 UTP6Q9NYH9 597 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 NCKIPSDQ9NZQ3 722 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 BTRCQ9Y297 605 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 SQORQ9Y6N5 450 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 OGTO15294 1046 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SNAP29O95721 258 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 ZNF26P17031 533 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 RABGGTBP53611 331 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 REP15Q6BDI9 236 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 CRTC3Q6UUV7 619 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 BRSK2Q8IWQ3 736 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 RPAP3Q9H6T3 665 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 UBIAD1Q9Y5Z9 338 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 NCF1BA6NI72 391 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 NCF1CA8MVU1 366 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 TSPAN3O60637 253 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 NADKO95544 446 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SNRPB2P08579 225 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 NCF1P14598 390 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 ZNF12P17014 697 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 TUFMP49411 452 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SAMD4BQ5PRF9 694 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 MICU2Q8IYU8 434 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 MIER2Q8N344 545 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 PCYOX1LQ8NBM8 494 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 FNIP1Q8TF40 1166 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 CPNE1Q99829 537 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 MED10Q9BTT4 135 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 C1orf50Q9BV19 199 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 RPF2Q9H7B2 306 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 DPP3Q9NY33 737 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 ARHGAP28Q9P2N2 729 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 ADAMTS7Q9UKP4 1686 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 DFFAO00273 331 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 MPP1Q00013 466 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 CLCQ05315 142 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SLC13A2Q13183 592 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 LIPMQ5VYY2 423 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 BTLAQ7Z6A9 289 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 PIGZQ86VD9 579 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 CHERPQ8IWX8 916 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SP8Q8IXZ3 490 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SLC15A3Q8IY34 581 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 SYTL1Q8IYJ3 562 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 GLT1D1Q96MS3 346 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 CEP44Q9C0F1 390 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 C6orf62Q9GZU0 229 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 TBCCD1Q9NVR7 557 aa16.09■□□□□ 0.17
PRPF40B-201ENST00000261897 IQCA1LA6NCM1 817 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 CCL22O00626 93 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 MFSD11O43934 449 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 ENTPD3O75355 529 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 DEAF1O75398 565 aaPredicted RBP16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 KRT8P05787 483 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 NR4A2P43354 598 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 CAPSQ13938 189 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 MAPRE2Q15555 327 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 PODNQ7Z5L7 613 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 GATAD2AQ86YP4 633 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 WDR49Q8IV35 697 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 NACA2Q9H009 215 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 GIMAP4Q9NUV9 329 aa16.08■□□□□ 0.17
PRPF40B-201ENST00000261897 A0A0A0MRY4 1105 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 STMN1P16949 149 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 NSUN2Q08J23 767 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 NFYCQ13952 458 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 GRTP1Q5TC63 336 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 ATF7IP2Q5U623 682 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 PMF1Q6P1K2 205 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 CCDC185Q8N715 623 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 ACMSDQ8TDX5 336 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 KIF12Q96FN5 646 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 SPATA13Q96N96 652 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 MRPL40Q9NQ50 206 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 IFT80Q9P2H3 777 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 SEPT3Q9UH03 358 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 PTGDR2Q9Y5Y4 395 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 GSTA4O15217 222 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 HCRTO43612 131 aa16.08■□□□□ 0.16
PRPF40B-201ENST00000261897 ASNSP08243 561 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms