RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TMEM135Q86UB9 458 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 LRRC52Q8N7C0 313 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 ELMO2Q96JJ3 720 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 EFCAB1Q9HAE3 211 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 IGSF9Q9P2J2 1179 aa14.67□□□□□ -0.06
SFSWAP-201ENST00000261674 KCNU1A8MYU2 1149 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 I6L893 689 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 DDHD2O94830 711 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 NPR3P17342 541 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PTPN1P18031 435 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PCSK7Q16549 785 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 DBN1Q16643 649 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 ANO4Q32M45 955 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PAN2Q504Q3 1202 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 LIPMQ5VYY2 423 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 GDF6Q6KF10 455 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 UGT2A3Q6UWM9 527 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 NT5DC4Q86YG4 428 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 LILRA2Q8N149 483 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 CRYBG2Q8N1P7 616 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 EXT2Q93063 718 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 TRPV6Q9H1D0 765 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 IL1RL2Q9HB29 575 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 EIF2B3Q9NR50 452 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 OR12D3Q9UGF7 316 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 NUDT5Q9UKK9 219 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 ACOT9Q9Y305 439 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 SHROOM3Q8TF72 1996 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 A0A1B0GTW7 788 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 XPO1O14980 1071 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 GPC4O75487 556 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PPARGP37231 505 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 DPP6P42658 865 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PTK2BQ14289 1009 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 CSHL1Q14406 222 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 NADK2Q4G0N4 442 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 ESRP1Q6NXG1 681 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 AMIGO2Q86SJ2 522 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 NPY6RQ99463 290 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 DUSP16Q9BY84 665 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 TKTL2Q9H0I9 626 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 RNF208Q9H0X6 261 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 UNC93B1Q9H1C4 597 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 WDCPQ9H6R7 721 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 ZDHHC7Q9NXF8 308 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 SEPT4O43236 478 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 DLX3O60479 287 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 FBXO21O94952 628 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PABPC4LP0CB38 370 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 GLDCP23378 1020 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 GRK4P32298 578 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 THPOP40225 353 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 LILRA4P59901 499 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 NAB1Q13506 487 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 OTUD1Q5VV17 481 aaPredicted RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 TWF2Q6IBS0 349 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 CEP70Q8NHQ1 597 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 PDCD6IPQ8WUM4 868 aaKnown RBP14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 SNX13Q9Y5W8 968 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 COMMD3-BMI1R4GMX3 469 aa14.66□□□□□ -0.06
SFSWAP-201ENST00000261674 RBM47A0AV96 593 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 GRID2O43424 1007 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 FAM200BP0CF97 657 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 PRKAA1Q13131 559 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 PDAP1Q13442 181 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 ARHGAP36Q6ZRI8 547 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 RP9Q8TA86 221 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 EZH1Q92800 747 aaPredicted RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 SLC2A6Q9UGQ3 507 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 ADAM28Q9UKQ2 775 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 PLXNA1Q9UIW2 1896 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 C17orf102A2RUQ5 167 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 DCLK1O15075 740 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 STAU1O95793 577 aaKnown RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 ALOX15P16050 662 aaPredicted RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 COG7P83436 770 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 CDKL1Q00532 357 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 PRPSAP1Q14558 356 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 PITRM1Q5JRX3 1037 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 METTL21CQ5VZV1 264 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 CLEC20AQ6ZU45 233 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 GPRIN1Q7Z2K8 1008 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 CEP97Q8IW35 865 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 RYBPQ8N488 228 aaPredicted RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 TTC16Q8NEE8 873 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 HHIPL1Q96JK4 782 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 ZNF560Q96MR9 790 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 DRC3Q9H069 523 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 CAAP1Q9H8G2 361 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 TRPC7Q9HCX4 862 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 IRAK4Q9NWZ3 460 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 TRIP12Q14669 1992 aaPredicted RBP14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 CASP8AP2Q9UKL3 1982 aa14.65□□□□□ -0.06
SFSWAP-201ENST00000261674 ZNF487B1APH4 448 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 DUSP11O75319 330 aaKnown RBP14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 TFAP2AP05549 437 aa14.64□□□□□ -0.07
SFSWAP-201ENST00000261674 PRAMEP78395 509 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms