RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CHST9Q7L1S5 443 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 TMEM150AQ86TG1 271 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 OTUD6BQ8N6M0 293 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 SPOCK2Q92563 424 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 TADA1Q96BN2 335 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 PRICKLE1Q96MT3 831 aaPredicted RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 RBBP8Q99708 897 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 PDFQ9HBH1 243 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 GKN1Q9NS71 199 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 PHTF1Q9UMS5 762 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 TCAF1Q9Y4C2 921 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 ASB3Q9Y575 518 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 LATS1O95835 1130 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 GLUD1P00367 558 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 SPRP35270 261 aaPredicted RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 CLCN4P51793 760 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 CSE1LP55060 971 aaKnown RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 GNA12Q03113 381 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 ITKQ08881 620 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 ADGRF1Q5T601 910 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 KREMEN2Q8NCW0 462 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 PRKAG3Q9UGI9 489 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 ARL2BPQ9Y2Y0 163 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 DENND4CQ5VZ89 1909 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 F11P03951 625 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 ALDOAP04075 364 aaKnown RBP28.03■■■□□ 2.08
CCM2-201ENST00000258781 C8AP07357 584 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 MMP2P08253 660 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 PABPC1LQ4VXU2 614 aaKnown RBP28.03■■■□□ 2.08
CCM2-201ENST00000258781 HSP90AA5PQ58FG0 334 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 STXBP5Q5T5C0 1151 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 ISL2Q96A47 359 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 SLC13A1Q9BZW2 595 aa28.03■■■□□ 2.08
CCM2-201ENST00000258781 AGO1Q9UL18 857 aaKnown RBP28.03■■■□□ 2.08
CCM2-201ENST00000258781 CD86P42081 329 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 SERPINB4P48594 390 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 LIMK2P53671 638 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 DSC2Q02487 901 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 POU6F1Q14863 301 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 STRA8Q7Z7C7 330 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 PGBD5Q8N414 524 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 PRKD2Q9BZL6 878 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 MANSC1Q9H8J5 431 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 ZNF334Q9HCZ1 680 aaPredicted RBP28.02■■■□□ 2.08
CCM2-201ENST00000258781 STOML2Q9UJZ1 356 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 CCT8L1PA6NM43 557 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 TPP1O14773 563 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 HOXD9P28356 352 aaPredicted RBP28.02■■■□□ 2.08
CCM2-201ENST00000258781 MAXP61244 160 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 RPS24P62847 133 aaKnown RBP28.02■■■□□ 2.08
CCM2-201ENST00000258781 PDE1BQ01064 536 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 RNF187Q5TA31 235 aaPredicted RBP28.02■■■□□ 2.08
CCM2-201ENST00000258781 PPP2R2DQ66LE6 453 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 ARRDC2Q8TBH0 407 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 HAUS2Q9NVX0 235 aa28.02■■■□□ 2.08
CCM2-201ENST00000258781 A0A1B0GVM2 712 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 WDR91A4D1P6 747 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 TCAF2A6NFQ2 919 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 MBL2P11226 248 aaPredicted RBP28.01■■■□□ 2.07
CCM2-201ENST00000258781 ZFRQ96KR1 1074 aaKnown RBP28.01■■■□□ 2.07
CCM2-201ENST00000258781 RANBP9Q96S59 729 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 AGAP2Q99490 1192 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 POLR1EQ9GZS1 481 aaKnown RBP28.01■■■□□ 2.07
CCM2-201ENST00000258781 IL21Q9HBE4 155 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 SLCO1B3Q9NPD5 702 aa28.01■■■□□ 2.07
CCM2-201ENST00000258781 ILVBLA1L0T0 632 aa28■■■□□ 2.07
CCM2-201ENST00000258781 IRF1P10914 325 aa28■■■□□ 2.07
CCM2-201ENST00000258781 MAGEA12P43365 314 aa28■■■□□ 2.07
CCM2-201ENST00000258781 ZNF235Q14590 738 aa28■■■□□ 2.07
CCM2-201ENST00000258781 SMAD1Q15797 465 aaKnown RBP28■■■□□ 2.07
CCM2-201ENST00000258781 PCSK7Q16549 785 aa28■■■□□ 2.07
CCM2-201ENST00000258781 SETD3Q86TU7 594 aaPredicted RBP28■■■□□ 2.07
CCM2-201ENST00000258781 TRIM42Q8IWZ5 723 aa28■■■□□ 2.07
CCM2-201ENST00000258781 CCT6BQ92526 530 aa28■■■□□ 2.07
CCM2-201ENST00000258781 ZNF778Q96MU6 729 aa28■■■□□ 2.07
CCM2-201ENST00000258781 MCMBPQ9BTE3 642 aa28■■■□□ 2.07
CCM2-201ENST00000258781 ZMYND15Q9H091 742 aa28■■■□□ 2.07
CCM2-201ENST00000258781 KDM4CQ9H3R0 1056 aa28■■■□□ 2.07
CCM2-201ENST00000258781 TIMM44O43615 452 aa28■■■□□ 2.07
CCM2-201ENST00000258781 GLRA3O75311 464 aa28■■■□□ 2.07
CCM2-201ENST00000258781 OLFM2O95897 454 aa28■■■□□ 2.07
CCM2-201ENST00000258781 ALG1LQ6GMV1 187 aa28■■■□□ 2.07
CCM2-201ENST00000258781 KYAT3Q6YP21 454 aaKnown RBP28■■■□□ 2.07
CCM2-201ENST00000258781 BBS5Q8N3I7 341 aa28■■■□□ 2.07
CCM2-201ENST00000258781 SLC22A17Q8WUG5 538 aa28■■■□□ 2.07
CCM2-201ENST00000258781 ATP2A3Q93084 1043 aa28■■■□□ 2.07
CCM2-201ENST00000258781 IARS2Q9NSE4 1012 aaKnown RBP28■■■□□ 2.07
CCM2-201ENST00000258781 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.99■■■□□ 2.07
CCM2-201ENST00000258781 EPOPA6NHQ4 379 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 KLF11O14901 512 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 ETFBP38117 255 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 CHRNA4P43681 627 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 SERPINB8P50452 374 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 SERPINH1P50454 418 aaKnown RBP27.99■■■□□ 2.07
CCM2-201ENST00000258781 SF3A3Q12874 501 aaKnown RBP eCLIP27.99■■■□□ 2.07
CCM2-201ENST00000258781 ZNF177Q13360 481 aaPredicted RBP27.99■■■□□ 2.07
CCM2-201ENST00000258781 CCDC149Q6ZUS6 474 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 CNTN4Q8IWV2 1026 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 WBP2Q969T9 261 aa27.99■■■□□ 2.07
CCM2-201ENST00000258781 TREX1Q9NSU2 369 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms