RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IRX1P78414 480 aaPredicted RBP19.16■□□□□ 0.66
PTPRE-201ENST00000254667 GRM3Q14832 879 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 SERPINA13PQ6UXR4 307 aa19.16■□□□□ 0.66
PTPRE-201ENST00000254667 USP2O75604 605 aaPredicted RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 NTSP30990 170 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 ABL2P42684 1182 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 IL5RAQ01344 420 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 SLC24A5Q71RS6 500 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 AHCYL2Q96HN2 611 aaKnown RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 C9orf16Q9BUW7 83 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 PCDH18Q9HCL0 1135 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 MAFBQ9Y5Q3 323 aaPredicted RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 RCCD1A6NED2 376 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 A8MX80 341 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 BIRC5O15392 142 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 RPL3P39023 403 aaKnown RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 TAS2R40P59535 323 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 SULT2A1Q06520 285 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 HSPA14Q0VDF9 509 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 DDR2Q16832 855 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 SVOPQ8N4V2 548 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 DPP10Q8N608 796 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 FCRL2Q96LA5 508 aaPredicted RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 HTATIP2Q9BUP3 242 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 KLQ9UEF7 1012 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 TMEM88BA6NKF7 163 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 CLDN5O00501 218 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 DUSP11O75319 330 aaKnown RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 CILPO75339 1184 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 CTSEP14091 401 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 SELPP16109 830 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 PBX1P40424 430 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 GPR1P46091 355 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 IRAK1BP1Q5VVH5 260 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 BSNDQ8WZ55 320 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 PPP3R2Q96LZ3 170 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 CDRT15Q96T59 188 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 VPS45Q9NRW7 570 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 KCNH1O95259 989 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 ATG7O95352 703 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 EIF2S1P05198 315 aaKnown RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 NAGLUP54802 743 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 SQLEQ14534 574 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 INTS11Q5TA45 600 aaKnown RBP19.15■□□□□ 0.66
PTPRE-201ENST00000254667 CASP12Q6UXS9 341 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 TTC7BQ86TV6 843 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 TRPC4APQ8TEL6 797 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 IRGQQ8WZA9 623 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 ALOX15BO15296 676 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 BRCC3P46736 316 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 PLEKHA7Q6IQ23 1121 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 OR6Y1Q8NGX8 325 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 ITFG1Q8TB96 612 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 FNIP1Q8TF40 1166 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 KREMEN1Q96MU8 473 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 EVA1BQ9NVM1 165 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 DUSP12Q9UNI6 340 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 LZTS1Q9Y250 596 aa19.15■□□□□ 0.66
PTPRE-201ENST00000254667 GLUD2P49448 558 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 PFKPQ01813 784 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 ZNF621Q6ZSS3 439 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 PPP1R13LQ8WUF5 828 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 PROX1Q92786 737 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 GLMNQ92990 594 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 LGMNQ99538 433 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.14■□□□□ 0.66
PTPRE-201ENST00000254667 INVSQ9Y283 1065 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 RIPK3Q9Y572 518 aa19.14■□□□□ 0.66
PTPRE-201ENST00000254667 MRPL42Q9Y6G3 142 aaKnown RBP19.14■□□□□ 0.66
PTPRE-201ENST00000254667 PIK3R1P27986 724 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 CCDC157Q569K6 752 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 TCHHL1Q5QJ38 904 aaPredicted RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 AADATQ8N5Z0 425 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 POU5F2Q8N7G0 328 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 BTN2A3PQ96KV6 586 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 DHX33Q9H6R0 707 aaKnown RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 CLDN11O75508 207 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 RECQL5O94762 991 aaPredicted RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 TFEBP19484 476 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 CRADDP78560 199 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 HEXDCQ8WVB3 486 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 PIK3R5Q8WYR1 880 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 HIC2Q96JB3 615 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 TM6SF2Q9BZW4 377 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 KIAA1522Q9P206 1035 aaPredicted RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 ADAM30Q9UKF2 790 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 NID2Q14112 1375 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 C1orf232A0A0U1RR37 186 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 GLUD1P00367 558 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 C4BPAP04003 597 aaKnown RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 TLX1P31314 330 aaPredicted RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 PTPRNQ16849 979 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 RAET1GQ6H3X3 334 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 KRT73Q86Y46 540 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 UTP15Q8TED0 518 aaKnown RBP19.14■□□□□ 0.65
PTPRE-201ENST00000254667 GDPD5Q8WTR4 605 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 RNF145Q96MT1 663 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 TMEM237Q96Q45 408 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 CYLDQ9NQC7 956 aa19.14■□□□□ 0.65
PTPRE-201ENST00000254667 AKAP7Q9P0M2 348 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms