RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 H2AFXP16104 143 aaPredicted RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 GOT1P17174 413 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 PIK3R1P27986 724 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 PSMB9P28065 219 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAM187BQ17R55 369 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 TMPRSS6Q8IU80 811 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAM126BQ8IXS8 530 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ZNF276Q8N554 614 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 WDR36Q8NI36 951 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 ETNPPLQ8TBG4 499 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ZNF670Q9BS34 389 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAIM2Q9BWQ8 316 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 EXO5Q9H790 373 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 RAB23Q9ULC3 237 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 H3BQF6 201 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 GRM6O15303 877 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 HGFP14210 728 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 LRPAP1P30533 357 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 NAA20P61599 178 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 TRIM25Q14258 630 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 INAQ16352 499 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 GPAT3Q53EU6 434 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 C16orf46Q6P387 395 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SLC30A9Q6PML9 568 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SH3RF1Q7Z6J0 888 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SNX32Q86XE0 403 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAM71AQ8IYT1 594 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 STAG3L4Q8TBR4 150 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 DCLRE1BQ9H816 532 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 KLHL1Q9NR64 748 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ZNF541Q9H0D2 1346 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CCDC189A1A4V9 331 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 OR6C75A6NL08 312 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 MYL12BO14950 172 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 BANF1O75531 89 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 MLYCDO95822 493 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 HLA-DQA2P01906 255 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 HIST1H2ABP04908 130 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 MYL12AP19105 171 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 NOL9Q5SY16 702 aaKnown RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 PRR23CQ6ZRP0 262 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 HIST3H2AQ7L7L0 130 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 ZFP28Q8NHY6 868 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 HIST1H2ACQ93077 130 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 TMEM237Q96Q45 408 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 SLC4A5Q9BY07 1137 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 AASDHPPTQ9NRN7 309 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 FAM105AQ9NUU6 356 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 CCDC167Q9P0B6 97 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 KIAA1522Q9P206 1035 aaPredicted RBP8.8□□□□□ -1
PTCD3-201ENST00000254630 MAPRE3Q9UPY8 281 aa8.8□□□□□ -1
PTCD3-201ENST00000254630 BCL9LQ86UU0 1499 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 CCDC85CA6NKD9 419 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 H3BN98 237 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 QSOX1O00391 747 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 IL1BP01584 269 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 CATP04040 527 aaKnown RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 SPATA31D3P0C874 917 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 EPORP19235 508 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 TALDO1P37837 337 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 TRIM16LQ309B1 348 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ZNF549Q6P9A3 640 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 SPATA31D4Q6ZUB0 917 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 FAM35AQ86V20 835 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 DDHD1Q8NEL9 900 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 KAT5Q92993 513 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 MYO19Q96H55 970 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 RNF145Q96MT1 663 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 RNF157Q96PX1 679 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ROGDIQ9GZN7 287 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 RPRD1BQ9NQG5 326 aaKnown RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 PPIEQ9UNP9 301 aaKnown RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 COG5Q9UP83 839 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 SLC9A8Q9Y2E8 581 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 SESN1Q9Y6P5 492 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 RPTORQ8N122 1335 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 C1orf232A0A0U1RR37 186 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 WTIPA6NIX2 430 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 ACSL4O60488 711 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 GLUD1P00367 558 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 CCDC166P0CW27 439 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 GSSP48637 474 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 HK2P52789 917 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 IFI35P80217 286 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 ABRQ12979 859 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 XKR6Q5GH73 641 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ZNF605Q86T29 641 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 SCAIQ8N9R8 606 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 SETD9Q8NE22 299 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 BHLHE22Q8NFJ8 381 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 OR4A15Q8NGL6 344 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ZSCAN18Q8TBC5 510 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 SELENOMQ8WWX9 145 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 AGO1Q9UL18 857 aaKnown RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 AKAP12Q02952 1782 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ROBO3Q96MS0 1386 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 ZSCAN5CA6NGD5 496 aaPredicted RBP8.79□□□□□ -1
PTCD3-201ENST00000254630 OR10H2O60403 315 aa8.79□□□□□ -1
PTCD3-201ENST00000254630 LDLRP01130 860 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms