RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ALLCQ8N6M5 410 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 MAGEE2Q8TD90 523 aaPredicted RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 AASDHPPTQ9NRN7 309 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 KIF1CO43896 1103 aaKnown RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ANXA5P08758 320 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 LINC00032P0C843 101 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ATP4AP20648 1035 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 TALDO1P37837 337 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ACAP1Q15027 740 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ZNF57Q68EA5 555 aaPredicted RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 KRT77Q7Z794 578 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 FBXL16Q8N461 479 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 LRRIQ1Q96JM4 1722 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ZNF37AP17032 561 aaPredicted RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 LBPP18428 481 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 RPL38P63173 70 aaKnown RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 FRG1Q14331 258 aaKnown RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 CES5AQ6NT32 575 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 FAM20CQ8IXL6 584 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 OSCP1Q8WVF1 389 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 REPS1Q96D71 796 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 CERS4Q9HA82 394 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 NDUFS2O75306 463 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 LYPLA1O75608 230 aaPredicted RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ERCC2P18074 760 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 GRIA3P42263 894 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 MMP14P50281 582 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 RABGGTBP53611 331 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 UNC93AQ86WB7 457 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ZNF276Q8N554 614 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 ANKRD52Q8NB46 1076 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 RMND5BQ96G75 393 aaPredicted RBP18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 MPP4Q96JB8 637 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 VAT1Q99536 393 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 PRRG3Q9BZD7 231 aa18.87■□□□□ 0.61
SMARCC1-201ENST00000254480 CHADO15335 359 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 FGF10O15520 208 aaPredicted RBP18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 KCNH1O95259 989 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 RPN2P04844 631 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 MYBL2P10244 700 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 IRAK1BP1Q5VVH5 260 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 SH3GL2Q99962 352 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 OPLAHO14841 1288 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 TRIM24O15164 1050 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 DUSP4Q13115 394 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 PAIP2BQ9ULR5 123 aaKnown RBP18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 ASTN2O75129 1339 aaPredicted RBP18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 OR6A2O95222 327 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 ERBB2P04626 1255 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 HSDL1Q3SXM5 330 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 ANKS1BQ7Z6G8 1248 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 STAG3L4Q8TBR4 150 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 PCDHGC5Q9Y5F6 944 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 CATP04040 527 aaKnown RBP18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 WASP42768 502 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 STX4Q12846 297 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 PSMD5Q16401 504 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 MBOAT7Q96N66 472 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 RAD21L1Q9H4I0 556 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 RIPK3Q9Y572 518 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 ARF4P18085 180 aaPredicted RBP18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 OR1D2P34982 312 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 SNAP47Q5SQN1 464 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 UTS2BQ765I0 119 aa18.86■□□□□ 0.61
SMARCC1-201ENST00000254480 CPSF6Q16630 551 aaKnown RBP eCLIP18.85■□□□□ 0.611e-7■□□□□ 9.1
SMARCC1-201ENST00000254480 CCDC149Q6ZUS6 474 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 KLHL3Q9UH77 587 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 PCDHB9Q9Y5E1 797 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 LOC100506127A0A0U1RQW1 187 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 NEDD8-MDP1E9PL57 170 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 TLR5O60602 858 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 KYAT3Q6YP21 454 aaKnown RBP18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 FIBCD1Q8N539 461 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 PPP1R16AQ96I34 528 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 UGT2B28Q9BY64 529 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ARHGEF3Q9NR81 526 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 GNPTGQ9UJJ9 305 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 SPATA2Q9UM82 520 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 GMFGO60234 142 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ZSWIM7Q19AV6 140 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 GPAT3Q53EU6 434 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 APBB2Q92870 758 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 DTNBP1Q96EV8 351 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ARHGAP28Q9P2N2 729 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 SPATA31C2B4DYI2 1134 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 TP73O15350 636 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 NOMO3P69849 1222 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 DEFB115Q30KQ5 88 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 XKR6Q5GH73 641 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 PRMT9Q6P2P2 845 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 APTXQ7Z2E3 356 aaKnown RBP18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ZDHHC13Q8IUH4 622 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 IZUMO1Q8IYV9 350 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 PRELID2Q8N945 189 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 BAP1Q92560 729 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 HDAC10Q969S8 669 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 ADI1Q9BV57 179 aa18.85■□□□□ 0.61
SMARCC1-201ENST00000254480 PAIP1Q9H074 479 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms