RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 NRG1Q02297 640 aaPredicted RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 FGL2Q14314 439 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 VWA3BQ502W6 1294 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 CDCP2Q5VXM1 449 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 LRRC31Q6UY01 552 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 KYAT3Q6YP21 454 aaKnown RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 GRIN3AQ8TCU5 1115 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 KLK6Q92876 244 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 MYOCQ99972 504 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 TUBGCP2Q9BSJ2 902 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 TNKS2Q9H2K2 1166 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 CLSTN2Q9H4D0 955 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 PRORYQ9H606 182 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 FZD3Q9NPG1 666 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 PPARGC1AQ9UBK2 798 aaKnown RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 IL36AQ9UHA7 158 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 NOCTQ9UK39 431 aaKnown RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 ANKRD36A6QL64 1941 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 SPINT1O43278 529 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 AP1G1O43747 822 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 BRINP1O60477 761 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CKMT1AP12532 417 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 ADRB3P13945 408 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 UCHL3P15374 230 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 OR1E1P30953 314 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 AKT2P31751 481 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CCNHP51946 323 aaPredicted RBP10.51□□□□□ -0.73
VPS50-201ENST00000251739 NEK3P51956 506 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CLDN2P57739 230 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 SEMG2Q02383 582 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 GNA12Q03113 381 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 SLC20A2Q08357 652 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CCDC15Q0P6D6 951 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 RAPGEF1Q13905 1077 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 RAB6CQ53S08 254 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 C2CD6Q53TS8 623 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 KIAA1161Q6NSJ0 714 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 RETSATQ6NUM9 610 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 PARS2Q7L3T8 475 aaKnown RBP10.51□□□□□ -0.73
VPS50-201ENST00000251739 NLRP14Q86W24 1093 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 ERICH1Q86X53 443 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 FAM131BQ86XD5 332 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CREBRFQ8IUR6 639 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 FAM114A1Q8IWE2 563 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 FAM181AQ8N9Y4 354 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 ARMC2Q8NEN0 867 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 FAM174AQ8TBP5 190 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 ISG20Q96AZ6 181 aaKnown RBP10.51□□□□□ -0.73
VPS50-201ENST00000251739 PPP1R16AQ96I34 528 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CFAP57Q96MR6 1250 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 KLF6Q99612 283 aaPredicted RBP10.51□□□□□ -0.73
VPS50-201ENST00000251739 C1QTNF2Q9BXJ5 285 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 ZYG11BQ9C0D3 744 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 RAB6CQ9H0N0 254 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 GANQ9H2C0 597 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 NLGN3Q9NZ94 848 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 CLCA2Q9UQC9 943 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 FADS3Q9Y5Q0 445 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 HS3ST3A1Q9Y663 406 aa10.51□□□□□ -0.73
VPS50-201ENST00000251739 TLN1Q9Y490 2541 aaKnown RBP10.51□□□□□ -0.73
VPS50-201ENST00000251739 POM121BA6NF01 834 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 A6NNZ2 444 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 GOLGA8SH3BPF8 625 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 RAD51BO15315 384 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 OPA1O60313 960 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 CYP1A1P04798 512 aaPredicted RBP10.5□□□□□ -0.73
VPS50-201ENST00000251739 GP1BAP07359 652 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 NME1P15531 152 aaKnown RBP10.5□□□□□ -0.73
VPS50-201ENST00000251739 MMP8P22894 467 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 L1CAMP32004 1257 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 E2F1Q01094 437 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 FZD2Q14332 565 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 TBC1D25Q3MII6 688 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 TPRG1LQ5T0D9 272 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 TAF3Q5VWG9 929 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 ZSCAN30Q86W11 494 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 DCP2Q8IU60 420 aaKnown RBP10.5□□□□□ -0.73
VPS50-201ENST00000251739 EMC1Q8N766 993 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 SLC20A1Q8WUM9 679 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 BMFQ96LC9 184 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 UBL7Q96S82 380 aaPredicted RBP10.5□□□□□ -0.73
VPS50-201ENST00000251739 HEPHQ9BQS7 1158 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 CALN1Q9BXU9 219 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 SLC17A9Q9BYT1 436 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 STK33Q9BYT3 514 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 RETREG1Q9H6L5 497 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 USP29Q9HBJ7 922 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 ATP13A1Q9HD20 1204 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 DYRK4Q9NR20 520 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 NDFIP2Q9NV92 336 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 PCDHB1Q9Y5F3 818 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 ACTL7AQ9Y615 435 aa10.5□□□□□ -0.73
VPS50-201ENST00000251739 SPTA1P02549 2419 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 SCN8AQ9UQD0 1980 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 SPTY2D1-AS1A0A0U1RR47 76 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 C2CD4BA6NLJ0 364 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 SCAMP1O15126 338 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 FFAR2O15552 330 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms