RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PDP2Q9P2J9 529 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 PRPF19Q9UMS4 504 aaKnown RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 ACOT9Q9Y305 439 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 RGSL1A5PLK6 1076 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 MATN3O15232 486 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 FGF10O15520 208 aaPredicted RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 PGK1P00558 417 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 LYNP07948 512 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 TFEBP19484 476 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 ARNTP27540 789 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 ADRA1AP35348 466 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 SERPINB5P36952 375 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 NAGLUP54802 743 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 POLE2P56282 527 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 RAB10P61026 200 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 XIAPP98170 497 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 MPP1Q00013 466 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 POTEHQ6S545 545 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 SDCCAG8Q86SQ7 713 aaPredicted RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 METTL23Q86XA0 190 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 DENND6AQ8IWF6 608 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 LSMEM2Q8N112 164 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 EFCAB3Q8N7B9 438 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 GPR78Q96P69 363 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 PPP1R12CQ9BZL4 782 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 SENP6Q9GZR1 1112 aaPredicted RBP21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 ACSS2Q9NR19 701 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 ZDHHC2Q9UIJ5 367 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 TCAF1Q9Y4C2 921 aa21.92■■□□□ 1.1
SH2D3A-201ENST00000245908 NEMP1O14524 444 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 VAPBO95292 243 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 UBTFL6P0CB48 400 aaPredicted RBP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 EPHA3P29320 983 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 NSUN2Q08J23 767 aaKnown RBP eCLIP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 ESRP1Q6NXG1 681 aaKnown RBP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 ACAD11Q709F0 780 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 KBTBD6Q86V97 674 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 MFSD6LQ8IWD5 586 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 PHC3Q8NDX5 983 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 PPP1R2P1Q96PQ5 205 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 CCDC28BQ9BUN5 200 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 CATSPERBQ9H7T0 1116 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 XPR1Q9UBH6 696 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 NLRC5Q86WI3 1866 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 FAM95CA0A1B0GW59 222 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 DLX3O60479 287 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 ADSLP30566 484 aaPredicted RBP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 CTBP1Q13363 440 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 ARTNQ5T4W7 220 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 SETD3Q86TU7 594 aaPredicted RBP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 SNX32Q86XE0 403 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 RP9Q8TA86 221 aaKnown RBP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 SYT17Q9BSW7 474 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 KLHL4Q9C0H6 718 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 SLC39A8Q9C0K1 460 aa21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 NYNRINQ9P2P1 1898 aaKnown RBP21.91■■□□□ 1.1
SH2D3A-201ENST00000245908 MYADML2A6NDP7 307 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 PAGE1O75459 146 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 CHRNA1P02708 482 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 CTSHP09668 335 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 STMN1P16949 149 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 PPARGP37231 505 aaPredicted RBP21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 C16orf89Q6UX73 402 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 CEP97Q8IW35 865 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 SCAMP5Q8TAC9 235 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 FAM81AQ8TBF8 368 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 PDCD6IPQ8WUM4 868 aaKnown RBP21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 FTHL17Q9BXU8 183 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 NUF2Q9BZD4 464 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 UBE2OQ9C0C9 1292 aaKnown RBP21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 EBF3Q9H4W6 596 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 ENTPD7Q9NQZ7 604 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 CDYLQ9Y232 598 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 H3BNX3 289 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 CASQ2O14958 399 aaPredicted RBP21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 CD1EP15812 388 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 RAG1P15918 1043 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 BRCC3P46736 316 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 NUDT2P50583 147 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 SFT2D3Q587I9 215 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 LPCAT4Q643R3 524 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 HIPK4Q8NE63 616 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 GDPD5Q8WTR4 605 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 NXNL1Q96CM4 212 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 TREX1Q9NSU2 369 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 STK39Q9UEW8 545 aa21.9■■□□□ 1.1
SH2D3A-201ENST00000245908 IGHA2P01877 340 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 HLA-DQB2P05538 268 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 SLC1A2P43004 574 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 DLG1Q12959 904 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 ZNF460Q14592 562 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 HERC3Q15034 1050 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 PPM1LQ5SGD2 360 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 TSTD2Q5T7W7 516 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 CD300LGQ6UXG3 332 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 LRRTM3Q86VH5 581 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 KYQ8NBH2 561 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 C2CD4AQ8NCU7 369 aaPredicted RBP21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 OR10T2Q8NGX3 314 aa21.89■■□□□ 1.09
SH2D3A-201ENST00000245908 TMEM209Q96SK2 561 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms