RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZFP37Q9Y6Q3 630 aaPredicted RBP18.72■□□□□ 0.59
HOXC11-201ENST00000243082 MKI67P46013 3256 aaKnown RBP18.72■□□□□ 0.59
HOXC11-201ENST00000243082 A0A096LPK6 155 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 A0A0D9SEW6 157 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 H3BNC9 293 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 SIN3BO75182 1162 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 UNC5CO95185 931 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 C2P06681 752 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 FGF3P11487 239 aaPredicted RBP18.71■□□□□ 0.59
HOXC11-201ENST00000243082 KCNA4P22459 653 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 SKIV2L2P42285 1042 aaKnown RBP18.71■□□□□ 0.59
HOXC11-201ENST00000243082 ALDH1A3P47895 512 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 STX3Q13277 289 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 ASRGL1Q7L266 308 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 MTDHQ86UE4 582 aaKnown RBP18.71■□□□□ 0.59
HOXC11-201ENST00000243082 DENND1CQ8IV53 801 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 DENND6AQ8IWF6 608 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 OR52K2Q8NGK3 314 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 TMEM120AQ9BXJ8 343 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 LTBP2Q14767 1821 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 MUSKO15146 869 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 STC2O76061 302 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 NUMBP49757 651 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 SERPINH1P50454 418 aaKnown RBP18.71■□□□□ 0.59
HOXC11-201ENST00000243082 IRF9Q00978 393 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 RAB33AQ14088 237 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 TMCO4Q5TGY1 634 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 ARMC3Q5W041 872 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 KIAA0930Q6ICG6 404 aaPredicted RBP18.71■□□□□ 0.59
HOXC11-201ENST00000243082 PLD4Q96BZ4 506 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 TRMT2BQ96GJ1 504 aaKnown RBP18.71■□□□□ 0.59
HOXC11-201ENST00000243082 RANBP9Q96S59 729 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 PRKD2Q9BZL6 878 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 RETREG1Q9H6L5 497 aa18.71■□□□□ 0.59
HOXC11-201ENST00000243082 CFAP73A6NFT4 308 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 GJB3O75712 270 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 HOXD9P28356 352 aaPredicted RBP18.7■□□□□ 0.58
HOXC11-201ENST00000243082 HADHAP40939 763 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 CDH4P55283 916 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 RPS24P62847 133 aaKnown RBP18.7■□□□□ 0.58
HOXC11-201ENST00000243082 CTBP1Q13363 440 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 PLD1Q13393 1074 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 SEPT6Q14141 434 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 CCDC153Q494R4 210 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 HSF5Q4G112 596 aaPredicted RBP18.7■□□□□ 0.58
HOXC11-201ENST00000243082 SPDYAQ5MJ70 313 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 C10orf107Q8IVU9 208 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 PRICKLE1Q96MT3 831 aaPredicted RBP18.7■□□□□ 0.58
HOXC11-201ENST00000243082 MAGEH1Q9H213 219 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 THAP1Q9NVV9 213 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 COPG2Q9UBF2 871 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 UXTQ9UBK9 157 aaPredicted RBP18.7■□□□□ 0.58
HOXC11-201ENST00000243082 HEY2Q9UBP5 337 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 SLC39A10Q9ULF5 831 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 TRIM33Q9UPN9 1127 aa18.7■□□□□ 0.58
HOXC11-201ENST00000243082 LOC285095A0A1B0GVY8 99 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 HEATR9A2RTY3 570 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 C2orf78A6NCI8 922 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 T-ENOLP0DO92 83 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 MYL2P10916 166 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 CSF2RAP15509 400 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 PAMP19021 973 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 CORO1AP31146 461 aaKnown RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 KCNJ2P63252 427 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 MPP1Q00013 466 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 GNA12Q03113 381 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 BTG3Q14201 252 aaPredicted RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 LRRC26Q2I0M4 334 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 TAF1BQ53T94 588 aaPredicted RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 TBC1D1Q86TI0 1168 aaPredicted RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 OR7D4Q8NG98 312 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 AUTS2Q8WXX7 1259 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 WBP2Q969T9 261 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 KLHL29Q96CT2 875 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 KLF16Q9BXK1 252 aaPredicted RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 ARHGEF3Q9NR81 526 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 SPG21Q9NZD8 308 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 ZFP69BQ9UJL9 534 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 CHD5Q8TDI0 1954 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 C2orf71A6NGG8 1288 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 ATXN1LP0C7T5 689 aaKnown RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 SGSHP51688 502 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 WDR5P61964 334 aaKnown RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 UGP2Q16851 508 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 CTC1Q2NKJ3 1217 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 RABGAP1LQ5R372 815 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 CLNKQ7Z7G1 428 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 DDX53Q86TM3 631 aaKnown RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 ARID3BQ8IVW6 561 aaPredicted RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF599Q96NL3 588 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 SEMA3CQ99985 751 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 POLR1EQ9GZS1 481 aaKnown RBP18.69■□□□□ 0.58
HOXC11-201ENST00000243082 TXLNGQ9NUQ3 528 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 PCDH10Q9P2E7 1040 aa18.69■□□□□ 0.58
HOXC11-201ENST00000243082 MIA3Q5JRA6 1907 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TRIM43BA6NCK2 446 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 ITM2AO43736 263 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 NQO1P15559 274 aaKnown RBP18.68■□□□□ 0.58
HOXC11-201ENST00000243082 LAG3P18627 525 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms