RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 VAC14Q08AM6 782 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 DGCR6Q14129 220 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 ZRANB3Q5FWF4 1079 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 HEATR4Q86WZ0 1026 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 FBXO39Q8N4B4 442 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 TRPC4APQ8TEL6 797 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 NDRG1Q92597 394 aaKnown RBP11.14□□□□□ -0.63
CCDC170-201ENST00000239374 RORBQ92753 470 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 RAD21L1Q9H4I0 556 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 DTLQ9NZJ0 730 aa11.14□□□□□ -0.63
CCDC170-201ENST00000239374 TRMT6Q9UJA5 497 aaKnown RBP11.14□□□□□ -0.63
CCDC170-201ENST00000239374 H3BRB1 525 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 SYNCRIPO60506 623 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 CTSHP09668 335 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 PCNAP12004 261 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 DNAJB2P25686 324 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 GPD2P43304 727 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 CDH15P55291 814 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 LSM3P62310 102 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 MBLAC2Q68D91 279 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 ANKS6Q68DC2 871 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 CCDC185Q8N715 623 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 ITFG1Q8TB96 612 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 HSPBAP1Q96EW2 488 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TWNKQ96RR1 684 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 PKP2Q99959 881 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TUT1Q9H6E5 874 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 DDX43Q9NXZ2 648 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TYW5A2RUC4 315 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 IRF9Q00978 393 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 PITRM1Q5JRX3 1037 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 BROXQ5VW32 411 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 IL23RQ5VWK5 629 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 CUZD1Q86UP6 607 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 PTGR2Q8N8N7 351 aaPredicted RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 SEMA4BQ9NPR2 832 aaPredicted RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 CIDEBQ9UHD4 219 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 MT-ND1P03886 318 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 HGFP14210 728 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 GCAP28676 217 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 NT5DC4Q86YG4 428 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 C8orf59Q8N0T1 100 aaPredicted RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 STRA6Q9BX79 667 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 SYTL2Q9HCH5 934 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 PNPLA8Q9NP80 782 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TBC1D13Q9NVG8 400 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 BTRCQ9Y297 605 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TRAF6Q9Y4K3 522 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 SLC30A1Q9Y6M5 507 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 C9JVG2 144 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 HPCAP84074 193 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 LSAMPQ13449 338 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 SEMA5AQ13591 1074 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 ZYG11AQ6WRX3 759 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 OFCC1Q8IZS5 231 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 ARHGEF4Q9NR80 690 aa11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TRNAU1APQ9NX07 287 aaKnown RBP11.13□□□□□ -0.63
CCDC170-201ENST00000239374 TSPAN3O60637 253 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 LTFP02788 710 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 AKT1P31749 480 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 TMEM63BQ5T3F8 832 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 SLC9A4Q6AI14 798 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 OR2T34Q8NGX1 318 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 OR2T3Q8NH03 318 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 SIGLEC10Q96LC7 697 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 GPR25O00155 361 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ZBTB24O43167 697 aaPredicted RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 BUD23O43709 281 aaKnown RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 PTPRAP18433 802 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 EGFLAMQ63HQ2 1017 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 SLC27A1Q6PCB7 646 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 SCIMPQ6UWF3 145 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 BNIPLQ7Z465 357 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 CAND1Q86VP6 1230 aaKnown RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 BPIFB6Q8NFQ5 453 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 OR52K2Q8NGK3 314 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 FBXO30Q8TB52 745 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ITFG2Q969R8 447 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ZFYVE28Q9HCC9 887 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 VPS45Q9NRW7 570 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 SLC38A7Q9NVC3 462 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 FAM8A1Q9UBU6 413 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 EVPLLA8MZ36 301 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 RECQL4O94761 1208 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 B3GAT3O94766 335 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ZNF682O95780 498 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 JAK1P23458 1154 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms