RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 INSRRP14616 1297 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ABATP80404 500 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MYBPC2Q14324 1141 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SPANXN3Q5MJ09 141 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 STYK1Q6J9G0 422 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 TMEM199Q8N511 208 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SMPDL3BQ92485 455 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 RIT2Q99578 217 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ALG9Q9H6U8 611 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CROTQ9UKG9 612 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SLC27A5Q9Y2P5 690 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 FCHO1O14526 889 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SATL1Q86VE3 508 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ACTRT2Q8TDY3 377 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 ADAM2Q99965 735 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 SPATC1LQ9H0A9 340 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 LMAN2LQ9H0V9 348 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 PLEKHA1Q9HB21 404 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
NEK9-201ENST00000238616 MYPNQ86TC9 1320 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 A0A096LPK6 155 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 WRBO00258 174 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 SERPINA3P01011 423 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 NCK1P16333 377 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 NEK3P51956 506 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 SEC13P55735 322 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.27
NEK9-201ENST00000238616 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 KBTBD2Q8IY47 623 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 GDPD5Q8WTR4 605 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 IMP3Q9NV31 184 aaKnown RBP13.33□□□□□ -0.27
NEK9-201ENST00000238616 PHF24Q9UPV7 400 aa13.33□□□□□ -0.27
NEK9-201ENST00000238616 CDHR2Q9BYE9 1310 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 RP1L1Q8IWN7 2480 aaPredicted RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ARP10275 920 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 RRM1P23921 792 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ABL2P42684 1182 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 KCTD8Q6ZWB6 473 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ATP13A3Q9H7F0 1226 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 INTS10Q9NVR2 710 aaKnown RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 KPNA4O00629 521 aaPredicted RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 ARHGAP31Q2M1Z3 1444 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 HHIPL2Q6UWX4 724 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ADCY4Q8NFM4 1077 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 OR2L3Q8NG85 312 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 TBC1D24Q9ULP9 559 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 CHP2O43745 196 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 CTPS1P17812 591 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 MADCAM1Q13477 382 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 HIPK1Q86Z02 1210 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 TEX47Q8TBZ9 253 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 MANFP55145 182 aaKnown RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 FAM187BQ17R55 369 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 MAP1SQ66K74 1059 aaPredicted RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 APLFQ8IW19 511 aaPredicted RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 CLIC5Q9NZA1 410 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 XKRYO14609 159 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 OR10H3O60404 316 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ETS1P14921 441 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 KCTD21Q4G0X4 260 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 ATG14Q6ZNE5 492 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 BHLHE22Q8NFJ8 381 aaPredicted RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 DNAJB14Q8TBM8 379 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 FATE1Q969F0 183 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 SERPINB11Q96P15 392 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 TRIM2Q9C040 744 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 AGO4Q9HCK5 861 aaKnown RBP13.33□□□□□ -0.28
NEK9-201ENST00000238616 PDP2Q9P2J9 529 aa13.33□□□□□ -0.28
NEK9-201ENST00000238616 BUD23O43709 281 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 FAM58BPP0C7Q3 252 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 TMEM253P0C7T8 217 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ACSM2AQ08AH3 577 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ACSM2BQ68CK6 577 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 OFCC1Q8IZS5 231 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ADSSL1Q8N142 457 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 TRMT13Q9NUP7 481 aaKnown RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 VPS4AQ9UN37 437 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 IRAK3Q9Y616 596 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ZBTB22O15209 634 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 SAGP10523 405 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
NEK9-201ENST00000238616 CDH17Q12864 832 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 INO80DQ53TQ3 878 aaPredicted RBP13.32□□□□□ -0.28
NEK9-201ENST00000238616 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CRTC3Q6UUV7 619 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 PRR23BQ6ZRT6 265 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ADGRG6Q86SQ4 1221 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
NEK9-201ENST00000238616 CAPSLQ8WWF8 208 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms