RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 CPA2P48052 419 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 SEPT6Q14141 434 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 RCN2Q14257 317 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 CYP4V2Q6ZWL3 525 aaPredicted RBP8.81□□□□□ -1
VPS4B-201ENST00000238497 SLC26A9Q7LBE3 791 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 AZIN2Q96A70 460 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 SERAC1Q96JX3 654 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 LINC00597Q9H2U6 94 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 CD248Q9HCU0 757 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 ARHGEF4Q9NR80 690 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 TMEM51Q9NW97 253 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 MPP6Q9NZW5 540 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 SH3BP1Q9Y3L3 701 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
VPS4B-201ENST00000238497 ZNF840PA6NDX5 716 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 PMPCBO75439 489 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 TAC1P20366 129 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 GCAP28676 217 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 SARNPP82979 210 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 MTAPQ13126 283 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 NR1H3Q13133 447 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 ACAP1Q15027 740 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 SLC25A52Q3SY17 297 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 SLC45A4Q5BKX6 768 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 HECTD3Q5T447 861 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 Q6ZS52 159 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 CRYBG2Q8N1P7 616 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 C8orf48Q96LL4 319 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 WDR83Q9BRX9 315 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 SHCBP1LQ9BZQ2 653 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 C8orf33Q9H7E9 229 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 TRPV4Q9HBA0 871 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 SLC40A1Q9NP59 571 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 ZMYM5Q9UJ78 669 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 HAO1Q9UJM8 370 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 DENND4AQ7Z401 1863 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 KNL1Q8NG31 2342 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 XPO1O14980 1071 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 KRT37O76014 449 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 TBX18O95935 607 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 NOS2P35228 1153 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 PXNP49023 591 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 FCHO2Q0JRZ9 810 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 GRSF1Q12849 480 aaKnown RBP eCLIP8.8□□□□□ -1
VPS4B-201ENST00000238497 ZNF638Q14966 1978 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 ARL13BQ3SXY8 428 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 SPDYCQ5MJ68 293 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 PAQR9Q6ZVX9 377 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 ZNF669Q96BR6 464 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 FAM136AQ96C01 138 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 CCSER2Q9H7U1 834 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 MYO15AQ9UKN7 3530 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 GRID1Q9ULK0 1009 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 H0Y3Z8 333 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 CBX6O95503 412 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 VAV1P15498 845 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 ALDH3A1P30838 453 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 HNRNPH1P31943 449 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 ETFBP38117 255 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 KCNJ2P63252 427 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 LGSNQ5TDP6 509 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 FYB2Q5VWT5 728 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 NCBP2-AS2Q69YL0 99 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 DRICH1Q6PGQ1 229 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 ZC3H14Q6PJT7 736 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 PRR23BQ6ZRT6 265 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 CPA6Q8N4T0 437 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 IPMKQ8NFU5 416 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 ZNF75CPQ92670 426 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 TRMT2BQ96GJ1 504 aaKnown RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 SPATA17Q96L03 361 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 HSFY1Q96LI6 401 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 MYRFLQ96LU7 910 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 RNF38Q9H0F5 515 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 ZFATQ9P243 1243 aa8.8□□□□□ -1
VPS4B-201ENST00000238497 FARP1Q9Y4F1 1045 aaPredicted RBP8.8□□□□□ -1
VPS4B-201ENST00000238497 LEFTY2O00292 366 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 TLR5O60602 858 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 RPSAP08865 295 aaKnown RBP8.79□□□□□ -1
VPS4B-201ENST00000238497 TGM2P21980 687 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 ADRA1BP35368 520 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 LRRC32Q14392 662 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 ANO4Q32M45 955 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 C10orf120Q5SQS8 335 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 NAIF1Q69YI7 327 aaPredicted RBP8.79□□□□□ -1
VPS4B-201ENST00000238497 UNC5AQ6ZN44 842 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 RAPH1Q70E73 1250 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 LIMS2Q7Z4I7 341 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 RALGPS2Q86X27 583 aaPredicted RBP8.79□□□□□ -1
VPS4B-201ENST00000238497 SLC25A41Q8N5S1 370 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 FITM2Q8N6M3 262 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 SPATA22Q8NHS9 363 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 MOCOSQ96EN8 888 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 STAMBPL1Q96FJ0 436 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 SGSM3Q96HU1 749 aa8.79□□□□□ -1
VPS4B-201ENST00000238497 MAGEB18Q96M61 343 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms