RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 LSM14AQ8ND56 463 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 SIMC1Q8NDZ2 872 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 PPHLN1Q8NEY8 458 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 C17orf75Q9HAS0 396 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 CCDC154A6NI56 674 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 BBIP1A8MTZ0 92 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 ERVV-2B6SEH9 535 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 SYNCRIPO60506 623 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 SUPT7LO94864 414 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF45Q02386 682 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 INSCQ1MX18 579 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 CBWD6Q4V339 395 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 HSD17B12Q53GQ0 312 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 CBWD3Q5JTY5 395 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 CBWD5Q5RIA9 395 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 RNASEH2BQ5TBB1 312 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 KBTBD6Q86V97 674 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 TNFRSF25Q93038 417 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 CIDECQ96AQ7 238 aaPredicted RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 GTPBP2Q9BX10 602 aaKnown RBP13.01□□□□□ -0.33
VAMP4-201ENST00000236192 IDI2Q9BXS1 227 aa13.01□□□□□ -0.33
VAMP4-201ENST00000236192 M0QYV0 167 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 MED24O75448 989 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 DNAJB5O75953 348 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 PCSK6P29122 969 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 PKLRP30613 574 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 PMS2P3Q13401 168 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 GK5Q6ZS86 529 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 ZBTB8OSQ8IWT0 167 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 FIBCD1Q8N539 461 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 PSKH2Q96QS6 385 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 TEX12Q9BXU0 123 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 WDR55Q9H6Y2 383 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 STAU2Q9NUL3 570 aaKnown RBP eCLIP13□□□□□ -0.33
VAMP4-201ENST00000236192 INTS10Q9NVR2 710 aaKnown RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 LIMD1Q9UGP4 676 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 CPSF3Q9UKF6 684 aaKnown RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
VAMP4-201ENST00000236192 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 WDR27A2RRH5 827 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 COL6A2P12110 1019 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 ACLYP53396 1101 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 UBXN2AP68543 259 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 TSNQ15631 228 aaKnown RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 STK11Q15831 433 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 VASH1Q7L8A9 365 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF605Q86T29 641 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 AADATQ8N5Z0 425 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 ABHD11Q8NFV4 315 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 INO80BQ9C086 356 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 ADAMTS10Q9H324 1103 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 KCTD10Q9H3F6 313 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 ADAM28Q9UKQ2 775 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 HEMK1Q9Y5R4 338 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 FAM240BA0A1B0GVZ2 78 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 UGT2B11O75310 529 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 GRIA4P48058 902 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 CEBPAP49715 358 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 ETV1P50549 477 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 PLEKHG6Q3KR16 790 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 LRRC38Q5VT99 294 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 CATSPER4Q7RTX7 472 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 HIPK1Q86Z02 1210 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 SLC22A9Q8IVM8 553 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 METTL25Q8N6Q8 603 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 FAM156AQ8NDB6 213 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 RDH11Q8TC12 318 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 MTMR9Q96QG7 549 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 LXNQ9BS40 222 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 FAM105AQ9NUU6 356 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 EGFL7Q9UHF1 273 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 DISP2A7MBM2 1401 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 KIF20BQ96Q89 1820 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 CNTNAP2Q9UHC6 1331 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 A8MV72 311 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 H3BMM5 538 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 PSMD3O43242 534 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 NRP2O60462 931 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 MTA2O94776 668 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 OPRL1P41146 370 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 DSTNP60981 165 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 SBK1Q52WX2 424 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 LCN1P1Q5VSP4 162 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 CCBE1Q6UXH8 406 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 BBS7Q8IWZ6 715 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 SAV1Q9H4B6 383 aaPredicted RBP13□□□□□ -0.33
VAMP4-201ENST00000236192 HSPB11Q9Y547 144 aa13□□□□□ -0.33
VAMP4-201ENST00000236192 FAM86B2P0C5J1 330 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF37AP17032 561 aaPredicted RBP12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF699Q32M78 642 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ANKRD26P1Q6NSI1 321 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SPESP1Q6UW49 350 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 CCDC36Q8IYA8 594 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ADAMTS16Q8TE57 1224 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 APBA2Q99767 749 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 NPLQ9BXD5 320 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms