RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OMDQ99983 421 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 DESI2Q9BSY9 194 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 SLC39A8Q9C0K1 460 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 BTBD1Q9H0C5 482 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 PCED1AQ9H1Q7 454 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 SGK2Q9HBY8 427 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 USP36Q9P275 1121 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 IPO11Q9UI26 975 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 TPX2Q9ULW0 747 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 CYP8B1Q9UNU6 501 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 REXO2Q9Y3B8 237 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ADAMTS9Q9P2N4 1935 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 SPEGQ15772 3267 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ASCC3Q8N3C0 2202 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 MACROD2A1Z1Q3 448 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 CCDC66A2RUB6 948 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 GIPC1O14908 333 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 FOXD2O60548 495 aaPredicted RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 PALMO75781 387 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 ZRANB2O95218 330 aaKnown RBP eCLIP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 POP4O95707 220 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 IGSF6O95976 241 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 IGLV3-19P01714 112 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 GLDCP23378 1020 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 PMLP29590 882 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 CHRNA3P32297 505 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 SLC8A1P32418 973 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 HSPA9P38646 679 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 PSMD8P48556 350 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 TPMTP51580 245 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 RENBPP51606 427 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 LIMK1P53667 647 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 RPL6Q02878 288 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 IL10RBQ08334 325 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 PAFAH1B3Q15102 231 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 ATP13A4Q4VNC1 1196 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 SYCP2LQ5T4T6 812 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 TIGD7Q6NT04 549 aaPredicted RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 KATNAL2Q8IYT4 538 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 RYBPQ8N488 228 aaPredicted RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 UBL4BQ8N7F7 174 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 OR2A12Q8NGT7 310 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 RLN3Q8WXF3 142 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 FAF2Q96CS3 445 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 ERLEC1Q96DZ1 483 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 GDAP1L1Q96MZ0 367 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 RNF157Q96PX1 679 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 HEPHQ9BQS7 1158 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 OSBPL1AQ9BXW6 950 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 LACRTQ9GZZ8 138 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 PABPC3Q9H361 631 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 NOL6Q9H6R4 1146 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 FBXL12Q9NXK8 326 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 IL36AQ9UHA7 158 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 AMFRQ9UKV5 643 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 FZD4Q9ULV1 537 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
SF3B6-201ENST00000233468 PCDHGA5Q9Y5G8 931 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 WDFY3Q8IZQ1 3526 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 ASPMQ8IZT6 3477 aa11.47□□□□□ -0.57
SF3B6-201ENST00000233468 TNRC6BQ9UPQ9 1833 aaKnown RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 IGHV1OR15-9A0A0B4J2B8 117 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 RCCD1A6NED2 376 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 LRRC72A6NJI9 287 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 MIF4GDA9UHW6 222 aaKnown RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 K7ERQ8 282 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 APOL1O14791 398 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 SLC7A4O43246 635 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 SMAD6O43541 496 aaKnown RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 RNASEH2AO75792 299 aaKnown RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 NEBLO76041 1014 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 TMCC1O94876 653 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 CD48P09326 243 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 IL4RP24394 825 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 MAPK8P45983 427 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 COPS2P61201 443 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 RHOAP61586 193 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 CREB5Q02930 508 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 WDR45BQ5MNZ6 344 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 PMS2CLQ68D20 193 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF662Q6ZS27 426 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 PEX26Q7Z412 305 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 RABEPKQ7Z6M1 372 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 RFX6Q8HWS3 928 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 CCDC50Q8IVM0 306 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 ARHGAP12Q8IWW6 846 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 OR2AP1Q8NGE2 309 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 EXD1Q8NHP7 514 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 PCDH19Q8TAB3 1148 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 RAPGEF5Q92565 580 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 TOE1Q96GM8 510 aaKnown RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 ALS2CR12Q96Q35 445 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 FAM129BQ96TA1 746 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 CINPQ9BW66 212 aaPredicted RBP11.46□□□□□ -0.57
SF3B6-201ENST00000233468 KLC2Q9H0B6 622 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 BRD8Q9H0E9 1235 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 SLC6A17Q9H1V8 727 aa11.46□□□□□ -0.57
SF3B6-201ENST00000233468 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms