RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 OR2AP1Q8NGE2 309 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 OR2I1PQ8NGU4 316 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 PCED1AQ9H1Q7 454 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 CAAP1Q9H8G2 361 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 RCOR3Q9P2K3 495 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
VEGFA-201ENST00000230480 IPO11Q9UI26 975 aaKnown RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 ZFR2Q9UPR6 939 aaKnown RBP13.95□□□□□ -0.18
VEGFA-201ENST00000230480 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-201ENST00000230480 ZBTB24O43167 697 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-201ENST00000230480 MFSD11O43934 449 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 MAP3K6O95382 1288 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 GJC1P36383 396 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 GBE1Q04446 702 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 IL10RBQ08334 325 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 LRRC38Q5VT99 294 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 LAYNQ6UX15 382 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 PARS2Q7L3T8 475 aaKnown RBP13.94□□□□□ -0.18
VEGFA-201ENST00000230480 ERMP1Q7Z2K6 904 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 LRRC57Q8N9N7 239 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 TPCN2Q8NHX9 752 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 GRIN3AQ8TCU5 1115 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 KRT35Q92764 455 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 EXOC2Q96KP1 924 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 RNF157Q96PX1 679 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-201ENST00000230480 HDAC8Q9BY41 377 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 IL36AQ9UHA7 158 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 GGT7Q9UJ14 662 aa13.94□□□□□ -0.18
VEGFA-201ENST00000230480 A0A1W2PR77 199 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 ZSCAN5CA6NGD5 496 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-201ENST00000230480 BTNL10A8MVZ5 291 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 RNASEH1O60930 286 aaKnown RBP13.93□□□□□ -0.18
VEGFA-201ENST00000230480 NDUFS2O75306 463 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 SERPINF2P08697 491 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 TIMP2P16035 220 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 GALNT2Q10471 571 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 PDK2Q15119 407 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 RSPO4Q2I0M5 234 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-201ENST00000230480 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-201ENST00000230480 TRIM61Q5EBN2 209 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 MFSD7Q6UXD7 560 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 ZCCHC9Q8N567 271 aaKnown RBP13.93□□□□□ -0.18
VEGFA-201ENST00000230480 OR2T34Q8NGX1 318 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 FUBP1Q96AE4 644 aaKnown RBP13.93□□□□□ -0.18
VEGFA-201ENST00000230480 OMDQ99983 421 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 ZNF670Q9BS34 389 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 DESI2Q9BSY9 194 aa13.93□□□□□ -0.18
VEGFA-201ENST00000230480 TDRD6O60522 2096 aaKnown RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 A0A1W2PPC4 97 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 TSPAN11A1L157 253 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 ARHGAP42A6NI28 874 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 DFFAO00273 331 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 KPNA3O00505 521 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 AREL1O15033 823 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 SLC7A4O43246 635 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 DAPK3O43293 454 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 FSBPO95073 299 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 POP4O95707 220 aaKnown RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 ITGB7P26010 798 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 HOXD12P35452 270 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 ARL4AP40617 200 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 SSR1P43307 286 aaKnown RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 PEX5P50542 639 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 DNA2P51530 1060 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 CCR5P51681 352 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 HADHQ16836 314 aaKnown RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 DUOXA1Q1HG43 343 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 TMEM259Q4ZIN3 620 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 TMCO3Q6UWJ1 677 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 NPNTQ6UXI9 565 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 ERN2Q76MJ5 926 aaKnown RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 TEX26Q8N6G2 289 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 OR14C36Q8NHC7 312 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 CASKIN2Q8WXE0 1202 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 RNF25Q96BH1 459 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 CPEB1Q9BZB8 566 aaKnown RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 TM9SF3Q9HD45 589 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 DTLQ9NZJ0 730 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 UBA2Q9UBT2 640 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-201ENST00000230480 SLC6A14Q9UN76 642 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 CA5BQ9Y2D0 317 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 FADS3Q9Y5Q0 445 aa13.92□□□□□ -0.18
VEGFA-201ENST00000230480 GRID2IPA4D2P6 1211 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 FAM47DPA6NHR8 397 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 C16orf96A6NNT2 1141 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 ZNF487B1APH4 448 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 TRAFD1O14545 582 aaPredicted RBP13.91□□□□□ -0.18
VEGFA-201ENST00000230480 SLC30A4O14863 429 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 KHNYNO15037 678 aaKnown RBP13.91□□□□□ -0.18
VEGFA-201ENST00000230480 PIGNO95427 931 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 PRNPP04156 253 aa13.91□□□□□ -0.18
VEGFA-201ENST00000230480 UGT2B4P06133 528 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms