RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PCNAP12004 261 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 MPSTP25325 297 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 ZSWIM7Q19AV6 140 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 NBPF12Q5TAG4 269 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 RNASEH2BQ5TBB1 312 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 VWA5B1Q5TIE3 1220 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 PROSER1Q86XN7 944 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 BRSK2Q8IWQ3 736 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CBR4Q8N4T8 237 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 FAM45AQ8TCE6 357 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CELF6Q96J87 481 aaKnown RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 VAT1Q99536 393 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 CINPQ9BW66 212 aaPredicted RBP13.95□□□□□ -0.18
HCFC2-201ENST00000229330 PRDM16Q9HAZ2 1276 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 POLE3Q9NRF9 147 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 DSEQ9UL01 958 aa13.95□□□□□ -0.18
HCFC2-201ENST00000229330 A0A087WZ62 844 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 FBXO21O94952 628 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CNTN1Q12860 1018 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 RALGDSQ12967 914 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 PEX6Q13608 980 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 C15orf59Q2T9L4 293 aaPredicted RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 SCUBE3Q8IX30 993 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CNTD1Q8N815 330 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 LEMD2Q8NC56 503 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ALG9Q9H6U8 611 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 PDGFCQ9NRA1 345 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ING3Q9NXR8 418 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ERAP1Q9NZ08 941 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 SIGLEC1Q9BZZ2 1709 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 BBIP1A8MTZ0 92 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 E5RJQ4 531 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CYB561D2O14569 222 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 TMCC2O75069 709 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CYP2B6P20813 491 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 IDH2P48735 452 aaKnown RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 KCTD8Q6ZWB6 473 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 HM13Q8TCT9 377 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 MRPL39Q9NYK5 338 aaKnown RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 SEC22BO75396 215 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CXCL8P10145 99 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 MYL12AP19105 171 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 SLC44A2Q8IWA5 706 aaPredicted RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 B3GALNT2Q8NCR0 500 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 HGH1Q9BTY7 390 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 COQ10BQ9H8M1 238 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 NT5MQ9NPB1 228 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 XPR1Q9UBH6 696 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ATRNO75882 1429 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 TMEM150BA6NC51 233 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 LOC110117498-PIK3R3F6TDL0 507 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CPB1P15086 417 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 TAL1P17542 331 aaPredicted RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 MZF1P28698 734 aaPredicted RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CDH8P55286 799 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CMC1Q7Z7K0 106 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 WDR36Q8NI36 951 aaKnown RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 NKD2Q969F2 451 aaPredicted RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 MUC3BQ9H195 1237 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ACTR8Q9H981 624 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 TBCCD1Q9NVR7 557 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 MBD2Q9UBB5 411 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 CNTNAP2Q9UHC6 1331 aa13.94□□□□□ -0.18
HCFC2-201ENST00000229330 ZC3H4Q9UPT8 1303 aaKnown RBP13.94□□□□□ -0.18
HCFC2-201ENST00000229330 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 H3BSA7 217 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 TMEM62Q0P6H9 643 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 C11orf88Q6PI97 169 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 NCCRP1Q6ZVX7 275 aaPredicted RBP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 IKBIPQ70UQ0 350 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 FAM83AQ86UY5 434 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 SPPL2CQ8IUH8 684 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 MINDY2Q8NBR6 621 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 SEMA4BQ9NPR2 832 aaPredicted RBP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 SLC38A7Q9NVC3 462 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 HNRNPLP14866 589 aaKnown RBP eCLIP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 RAB10P61026 200 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 PTP4A2Q12974 167 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 PYDC2Q56P42 97 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 ATAD3BQ5T9A4 648 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 APOBEC3HQ6NTF7 200 aaKnown RBP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 PPP4R4Q6NUP7 873 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 NEPROQ6NW34 567 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 KIAA0408Q6ZU52 694 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 SENP6Q9GZR1 1112 aaPredicted RBP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 PIDD1Q9HB75 910 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 TAS2R13Q9NYV9 303 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 GNPTGQ9UJJ9 305 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 G3V2T6 193 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 TFECO14948 347 aaPredicted RBP13.93□□□□□ -0.18
HCFC2-201ENST00000229330 SLC2A3P11169 496 aa13.93□□□□□ -0.18
HCFC2-201ENST00000229330 HOXB8P17481 243 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms