RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CEP97Q8IW35 865 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 PGAM4Q8N0Y7 254 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ICA1LQ8NDH6 482 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 IRGQQ8WZA9 623 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 FCRL5Q96RD9 977 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 CDRT15Q96T59 188 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 ZBTB26Q9HCK0 441 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 CSNK1G1Q9HCP0 422 aa16.49■□□□□ 0.23
LTBR-201ENST00000228918 FAM95CA0A1B0GW59 222 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 DFFAO00273 331 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 XRCC1P18887 633 aaPredicted RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 CCNCP24863 283 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 ARNTP27540 789 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 ARCN1P48444 511 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 POLD2P49005 469 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 AFF1P51825 1210 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 CTBP1Q13363 440 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 PDK3Q15120 406 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 DENND5AQ6IQ26 1287 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 ARHGAP22Q7Z5H3 698 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 ARHGAP12Q8IWW6 846 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 IPMKQ8NFU5 416 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 DQX1Q8TE96 717 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 PDCD6IPQ8WUM4 868 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 MYLPFQ96A32 169 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 SPATA16Q9BXB7 569 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 FTHL17Q9BXU8 183 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 OSBPL2Q9H1P3 480 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 C17orf102A2RUQ5 167 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 CAPN8A6NHC0 703 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 TADA2AO75478 443 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 VAPBO95292 243 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 STMN1P16949 149 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 FLOT2Q14254 428 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 FAM110CQ1W6H9 321 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 CNPY1Q3B7I2 92 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 RWDD4Q6NW29 188 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 ESRP1Q6NXG1 681 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 UGT2A3Q6UWM9 527 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 CCDC117Q8IWD4 279 aaPredicted RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 ATPAF2Q8N5M1 289 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 PPHLN1Q8NEY8 458 aaKnown RBP16.48■□□□□ 0.23
LTBR-201ENST00000228918 B4GALNT2Q8NHY0 566 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 NXNL1Q96CM4 212 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 DCUN1D1Q96GG9 259 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 GAD1Q99259 594 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 FICDQ9BVA6 458 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 GLOD4Q9HC38 313 aa16.48■□□□□ 0.23
LTBR-201ENST00000228918 A0A1B0GVG6 124 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 ANXA9O76027 345 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 MYL3P08590 195 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 GRIA2P42262 883 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 SLC1A2P43004 574 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 FOLH1Q04609 750 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 DYNC1I2Q13409 638 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 CEACAM7Q14002 265 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 NXNQ6DKJ4 435 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 KDM1BQ8NB78 822 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 NCSTNQ92542 709 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 RNF34Q969K3 372 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 MARK4Q96L34 752 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 IL12RB2Q99665 862 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 WDR41Q9HAD4 459 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 TCAF1Q9Y4C2 921 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 DOCK3Q8IZD9 2030 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 BPTFQ12830 3046 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 TXNDC9O14530 226 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 AP1G1O43747 822 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 NPHS1O60500 1241 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 IGLV3-25P01717 112 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 THP07101 528 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 ENO3P13929 434 aaPredicted RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 GSTT1P30711 240 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 CYP2C18P33260 490 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 DPP6P42658 865 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 CHN2P52757 468 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 MRPS22P82650 360 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 RASIP1Q5U651 963 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 ZFP1Q6P2D0 407 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 PIP4K2CQ8TBX8 421 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 PTCD2Q8WV60 388 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 MAELQ96JY0 434 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 GCNAQ96QF7 691 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 RTP3Q9BQQ7 232 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 MRPL46Q9H2W6 279 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 MRM3Q9HC36 420 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 MIOSQ9NXC5 875 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 RIMS3Q9UJD0 308 aa16.47■□□□□ 0.23
LTBR-201ENST00000228918 COPG1Q9Y678 874 aaKnown RBP16.47■□□□□ 0.23
LTBR-201ENST00000228918 NYNRINQ9P2P1 1898 aaKnown RBP16.46■□□□□ 0.23
LTBR-201ENST00000228918 TMEM233B4DJY2 109 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 PCSK1P29120 753 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 HOXC8P31273 242 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 ADRA1AP35348 466 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 PKNOX1P55347 436 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 ADGRE1Q14246 886 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 RFTN1Q14699 578 aaPredicted RBP16.46■□□□□ 0.23
LTBR-201ENST00000228918 POTEHQ6S545 545 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 TMEM126BQ8IUX1 230 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 SPATA6LQ8N4H0 392 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms