RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ZNF12P17014 697 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 TGM2P21980 687 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 MAGEA3P43357 314 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 VGLL4Q14135 290 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 RGS21Q2M5E4 152 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SEL1L3Q68CR1 1132 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 IGFN1Q86VF2 1251 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 TMEM126BQ8IUX1 230 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SLC16A10Q8TF71 515 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 CHPT1Q8WUD6 406 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 CANT1Q8WVQ1 401 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 DLG3Q92796 817 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 COPS5Q92905 334 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 ANKRD60Q9BZ19 345 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 EFCAB1Q9HAE3 211 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 SYBUQ9NX95 663 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 POU2F3Q9UKI9 436 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 AP4E1Q9UPM8 1137 aa14.28□□□□□ -0.12
SF1-201ENST00000227503 DPYSL4O14531 572 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 CAPNS1P04632 268 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 MATN1P21941 496 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 CA8P35219 290 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 AVPR1AP37288 418 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 NAGLUP54802 743 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 TRIM16LQ309B1 348 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 BOLA3Q53S33 107 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 LRRC8EQ6NSJ5 796 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 NIPAL1Q6NVV3 410 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 KCTD8Q6ZWB6 473 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.121e-8■■■■□ 20.5
SF1-201ENST00000227503 SNX27Q96L92 541 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 MPHOSPH6Q99547 160 aaKnown RBP14.27□□□□□ -0.12
SF1-201ENST00000227503 PDZD7Q9H5P4 517 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 ASB7Q9H672 318 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 DAPK2Q9UIK4 370 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 PCDHGA7Q9Y5G6 932 aa14.27□□□□□ -0.12
SF1-201ENST00000227503 TRIM38O00635 465 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 DLGAP1O14490 977 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 KDM1AO60341 852 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 HBP1O60381 514 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 CAPN15O75808 1086 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 CNMDO75829 334 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 C22orf31O95567 290 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 POLR2IP36954 125 aaKnown RBP14.27□□□□□ -0.13
SF1-201ENST00000227503 IREB2P48200 963 aaKnown RBP14.27□□□□□ -0.13
SF1-201ENST00000227503 RGS7P49802 495 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 TUBA4AP68366 448 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 DMPKQ09013 629 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 FAM187BQ17R55 369 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 MAMDC4Q6UXC1 1216 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 RPS27LQ71UM5 84 aaKnown RBP14.27□□□□□ -0.13
SF1-201ENST00000227503 PIGZQ86VD9 579 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 C12orf29Q8N999 325 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 ACDQ96AP0 544 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 ILKAPQ9H0C8 392 aaPredicted RBP14.27□□□□□ -0.13
SF1-201ENST00000227503 IL1RL2Q9HB29 575 aa14.27□□□□□ -0.13
SF1-201ENST00000227503 ZNF638Q14966 1978 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 A0A096LPK6 155 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 MT-ND1P03886 318 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 TFEBP19484 476 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 TCEA1P23193 301 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 MAP4P27816 1152 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 GRIA4P48058 902 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SLC26A2P50443 739 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 TRIM25Q14258 630 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 DGKDQ16760 1214 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 PIWIL3Q7Z3Z3 882 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 BPIFB6Q8NFQ5 453 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 TFAP2CQ92754 450 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 CPB2Q96IY4 423 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SMARCAD1Q9H4L7 1026 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 FAM96AQ9H5X1 160 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 ZBTB26Q9HCK0 441 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 CCDC167Q9P0B6 97 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 PPP2R3BQ9Y5P8 575 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 TANC1Q9C0D5 1861 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SOBPA7XYQ1 873 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 HDAC3O15379 428 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 AQP9O43315 295 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 CNOT3O75175 753 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 ACADVLP49748 655 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 NKX2-5P52952 324 aaPredicted RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 TNFAIP2Q03169 654 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 DNASE1L3Q13609 305 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 DPYSQ14117 519 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SEPT6Q14141 434 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SF3B4Q15427 424 aaKnown RBP eCLIP14.26□□□□□ -0.132e-7■■■■□ 24.8
SF1-201ENST00000227503 THOC7Q6I9Y2 204 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 PMF1Q6P1K2 205 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 FBXO16Q8IX29 292 aaPredicted RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
SF1-201ENST00000227503 MCUQ8NE86 351 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 HM13Q8TCT9 377 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SGCDQ92629 289 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SNRNP25Q9BV90 132 aaKnown RBP14.26□□□□□ -0.13
SF1-201ENST00000227503 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 SEPT10Q9P0V9 454 aa14.26□□□□□ -0.13
SF1-201ENST00000227503 BCAP29Q9UHQ4 241 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms