RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 UTP15Q8TED0 518 aaKnown RBP18.64■□□□□ 0.57
CLIP2-201ENST00000223398 ACAT2Q9BWD1 397 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 IL1RAPL1Q9NZN1 696 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 PCDHA11Q9Y5I1 949 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.64■□□□□ 0.57
CLIP2-201ENST00000223398 CLTBP09497 229 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 ATP6V1C1P21283 382 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 ARL2P36404 184 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 VSTM1Q6UX27 236 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 C1orf127Q8N9H9 656 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 CAVIN3Q969G5 261 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 CPXM1Q96SM3 734 aa18.64■□□□□ 0.57
CLIP2-201ENST00000223398 LPOP22079 712 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ADRA1DP25100 572 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 IRX1P78414 480 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ZBTB17Q13105 803 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 CHST9Q7L1S5 443 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 KREMEN1Q96MU8 473 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 IMP3Q9NV31 184 aaKnown RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 THAP1Q9NVV9 213 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 CACNG4Q9UBN1 327 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ASF1AQ9Y294 204 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 LRRC10BA6NIK2 292 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 S100A3P33764 101 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 PIK3CGP48736 1102 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 TLE2Q04725 743 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 LRRC38Q5VT99 294 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 SRLQ86TD4 932 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 CREG2Q8IUH2 290 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 GPR156Q8NFN8 814 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 PWWP2AQ96N64 755 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 PRDM16Q9HAZ2 1276 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 RPTORQ8N122 1335 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 hCG_1818297A0A087WSY0 165 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 TKTP29401 623 aaKnown RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 MC4RP32245 332 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 FGD3Q5JSP0 725 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 BRMS1LQ5PSV4 323 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 CLYBLQ8N0X4 340 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ALLCQ8N6M5 410 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 SLC12A4Q9UP95 1085 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 SAC3D1A6NKF1 404 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 NTRK1P04629 796 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 CCND1P24385 295 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ICAM3P32942 547 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 TRIM69Q86WT6 500 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 HDAC10Q969S8 669 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 BTN2A3PQ96KV6 586 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 PCDHGC5Q9Y5F6 944 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 PHLPP1O60346 1717 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 AVILO75366 819 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 FGF19O95750 216 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 FTH1P02794 183 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ANGPT1Q15389 498 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 MPPE1Q53F39 396 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 FAM45BPQ6NSW5 357 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 SCIMPQ6UWF3 145 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 NKAPQ8N5F7 415 aaKnown RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 FAM45AQ8TCE6 357 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 BAP1Q92560 729 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 MYO19Q96H55 970 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 B3GALT6Q96L58 329 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 TNKS2Q9H2K2 1166 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 SYBUQ9NX95 663 aa18.63■□□□□ 0.57
CLIP2-201ENST00000223398 EVLQ9UI08 416 aaPredicted RBP18.63■□□□□ 0.57
CLIP2-201ENST00000223398 ANKS1BQ7Z6G8 1248 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 MARK4Q96L34 752 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TSPAN18Q96SJ8 248 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 SLC40A1Q9NP59 571 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 CALB2P22676 271 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 SMARCB1Q12824 385 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 VARS2Q5ST30 1063 aaKnown RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 HYIQ5T013 277 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 FAM228AQ86W67 206 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 KYQ8NBH2 561 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TNFRSF25Q93038 417 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 DUS2Q9NX74 493 aaKnown RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 KLHL3Q9UH77 587 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 CILPO75339 1184 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 WNT3AP56704 352 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 METTL3Q86U44 580 aaKnown RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 EMID1Q96A84 441 aaPredicted RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 VPS33AQ96AX1 596 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 C11orf49Q9H6J7 331 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 EXO5Q9H790 373 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 COMMD8Q9NX08 183 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 ARMCX1Q9P291 453 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 VTI1BQ9UEU0 232 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 SNTNA6NMZ2 147 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TFEBP19484 476 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 NTSP30990 170 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TCHHL1Q5QJ38 904 aaPredicted RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TBCELQ5QJ74 424 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TMEM154Q6P9G4 183 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 DNAJC1Q96KC8 554 aaKnown RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 TMEM245Q9H330 911 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms