RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 KLHL23Q8NBE8 558 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 MOSPD2Q8NHP6 518 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 ADGRA3Q8IWK6 1321 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 SLC25A14O95258 325 aaPredicted RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 ERBB2P04626 1255 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 CCDC166P0CW27 439 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 PURAQ00577 322 aaKnown RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 ANKRD7Q92527 254 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 GEMIN8Q9NWZ8 242 aaKnown RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 CCDC167Q9P0B6 97 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 DLGAP2Q9P1A6 1054 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 CNTNAP1P78357 1384 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 DUSP11O75319 330 aaKnown RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 LDLRP01130 860 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 PRKCIP41743 596 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 KCNA10Q16322 511 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 BHLHB9Q6PI77 547 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 OTOP2Q7RTS6 562 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 IFNLR1Q8IU57 520 aaPredicted RBP19.14■□□□□ 0.65
SMPD3-201ENST00000219334 FAM71AQ8IYT1 594 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 EXOC2Q96KP1 924 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 NOD2Q9HC29 1040 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 ASTN1O14525 1302 aa19.14■□□□□ 0.65
SMPD3-201ENST00000219334 PIGNO95427 931 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 LBPP18428 481 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 NUP62P37198 522 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-201ENST00000219334 ZACNQ401N2 412 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 PPP1R15BQ5SWA1 713 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 FERD3LQ96RJ6 166 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 EPB41L4BQ9H329 900 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 KIDINS220Q9ULH0 1771 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 GRM6O15303 877 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 NAA20P61599 178 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 KPNB1Q14974 876 aaKnown RBP19.13■□□□□ 0.65
SMPD3-201ENST00000219334 C9orf57Q5W0N0 161 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 VSTM1Q6UX27 236 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 TLR10Q9BXR5 811 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 SLC12A4Q9UP95 1085 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 MAGEA13PA6NCF6 341 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 CDK18Q07002 472 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 TRMT5Q32P41 509 aaKnown RBP19.13■□□□□ 0.65
SMPD3-201ENST00000219334 UNC5AQ6ZN44 842 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 GPR20Q99678 358 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 FANCEQ9HB96 536 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 TMEM216Q9P0N5 145 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 FAM20BO75063 409 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 CYP1A2P05177 515 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 ERCC2P18074 760 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 STX4Q12846 297 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 BEND7Q8N7W2 519 aaPredicted RBP19.13■□□□□ 0.65
SMPD3-201ENST00000219334 OR10G6Q8NH81 332 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 RNF145Q96MT1 663 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 S100A13Q99584 98 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 COPS8Q99627 209 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 ASF1AQ9Y294 204 aa19.13■□□□□ 0.65
SMPD3-201ENST00000219334 NFATC1O95644 943 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 CTPS1P17812 591 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 MAGEA10P43363 369 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 ABRQ12979 859 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 OTUD3Q5T2D3 398 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 MSL3Q8N5Y2 521 aaKnown RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 PTGR2Q8N8N7 351 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 DCLRE1BQ9H816 532 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 PDP2Q9P2J9 529 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 YDJCA8MPS7 323 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 SMNDC1O75940 238 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 CALCAP01258 141 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 ADRA1DP25100 572 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 RPL3P39023 403 aaKnown RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 RPL14P50914 215 aaKnown RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 CERS2Q96G23 380 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 FCRL2Q96LA5 508 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 KLHL4Q9C0H6 718 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 GPN3Q9UHW5 284 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 PPIEQ9UNP9 301 aaKnown RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 PCDHB9Q9Y5E1 797 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 TPP1O14773 563 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 HNF4AP41235 474 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 CRATP43155 626 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 TMC3Q7Z5M5 1100 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 PHF13Q86YI8 300 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 TMPRSS6Q8IU80 811 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 HSD17B14Q9BPX1 270 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 SLITRK2Q9H156 845 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 KLHL3Q9UH77 587 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 PADI3Q9ULW8 664 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 GOT1P17174 413 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 ABCG1P45844 678 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 MPPE1Q53F39 396 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 INPP4AQ96PE3 977 aaPredicted RBP19.12■□□□□ 0.65
SMPD3-201ENST00000219334 APOL4Q9BPW4 351 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 FUT8Q9BYC5 575 aa19.12■□□□□ 0.65
SMPD3-201ENST00000219334 FAM25AB3EWG3 89 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 FAM25CB3EWG5 89 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 FAM25GB3EWG6 89 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 FCHO1O14526 889 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 MLYCDO95822 493 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 ZSCAN5DPP0CG00 497 aa19.11■□□□□ 0.65
SMPD3-201ENST00000219334 SLC41A1Q8IVJ1 513 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms