RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 MAGEA6P43360 314 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 PTPRCAPQ14761 206 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 RCN1Q15293 331 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 RTP2Q5QGT7 225 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 PIK3R6Q5UE93 754 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 FSTL4Q6MZW2 842 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 CLNKQ7Z7G1 428 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 SLC15A3Q8IY34 581 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 ARHGAP18Q8N392 663 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 SCYL1Q96KG9 808 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 EXOC2Q96KP1 924 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 RPRD1AQ96P16 312 aaPredicted RBP10.11□□□□□ -0.79
USP11-201ENST00000218348 CYP2S1Q96SQ9 504 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 FRMD8Q9BZ67 464 aaPredicted RBP10.11□□□□□ -0.79
USP11-201ENST00000218348 LRRC40Q9H9A6 602 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 SNX15Q9NRS6 342 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 PNPOQ9NVS9 261 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 ATP11BQ9Y2G3 1177 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 PLXNA4Q9HCM2 1894 aa10.11□□□□□ -0.79
USP11-201ENST00000218348 GOLGA8CPA6NN73 597 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 AURKAO14965 403 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 UNC5CO95185 931 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 TBX4P57082 545 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 GALNT2Q10471 571 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SPOUT1Q5T280 376 aaKnown RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 BNIPLQ7Z465 357 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 COLGALT2Q8IYK4 626 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SLC9A7Q96T83 725 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 PKMYT1Q99640 499 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 OMDQ99983 421 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 GBA3Q9H227 469 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 RETREG1Q9H6L5 497 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 PNPLA8Q9NP80 782 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 IPO11Q9UI26 975 aaKnown RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 PAIP2BQ9ULR5 123 aaKnown RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 DNAJC16Q9Y2G8 782 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 COL4A4P53420 1690 aaPredicted RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 TNFRSF10BO14763 440 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 DCTN3O75935 186 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 HAUS5O94927 633 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 PDHA1P08559 390 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 DNAJB2P25686 324 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SLC11A1P49279 550 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 KCNQ1P51787 676 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SLC10A7Q0GE19 358 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 BFSP2Q13515 415 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 PEX6Q13608 980 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 UBAP2LQ14157 1087 aaKnown RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 ATG14Q6ZNE5 492 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 ARHGAP12Q8IWW6 846 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 NUP93Q8N1F7 819 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 POU5F2Q8N7G0 328 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 FBXO27Q8NI29 283 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 AGAP11Q8TF27 550 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 ABTB1Q969K4 478 aaPredicted RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 UTP4Q969X6 686 aaKnown RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 HMCESQ96FZ2 354 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 NDNQ99608 321 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 KCNK13Q9HB14 408 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 IGSF9Q9P2J2 1179 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 FETUBQ9UGM5 382 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 DSEQ9UL01 958 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 EMCNQ9ULC0 261 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 CDY1Q9Y6F8 540 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 A0A0U1RQS6 177 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 MEI4A8MW99 385 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 FCHO1O14526 889 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 DSC2Q02487 901 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 PRPSAP1Q14558 356 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SLC41A1Q8IVJ1 513 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 IGSF8Q969P0 613 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 PSMG2Q969U7 264 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 HDAC11Q96DB2 347 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 TBC1D10AQ9BXI6 508 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 SMPD4Q9NXE4 827 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 ADAM28Q9UKQ2 775 aa10.1□□□□□ -0.79
USP11-201ENST00000218348 MTF2Q9Y483 593 aaPredicted RBP10.1□□□□□ -0.79
USP11-201ENST00000218348 A0A096LPK6 155 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 OR51F1A6NGY5 319 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 NEMP1O14524 444 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ENPP3O14638 875 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 PARNO95453 639 aaKnown RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 ALDH2P05091 517 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 CYP11A1P05108 521 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 BPGMP07738 259 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 HNRNPCP07910 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP11-201ENST00000218348 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 SPATA31D3P0C874 917 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 DHRS4L1P0CG22 281 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 CD86P42081 329 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 NIPAL4Q0D2K0 466 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 SCAPQ12770 1279 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GRM3Q14832 879 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 RASA2Q15283 850 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 MAPRE1Q15691 268 aaKnown RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 ITPRIPL1Q6GPH6 555 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms