RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GRK7Q8WTQ7 553 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 SUN2Q9UH99 717 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 TRHDEQ9UKU6 1024 aa27.64■■■□□ 2.02
CHMP4B-201ENST00000217402 SYNCRIPO60506 623 aaKnown RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 ECEL1O95672 775 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 NFKB1P19838 968 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 CD68P34810 354 aaPredicted RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 CCNHP51946 323 aaPredicted RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 DSC2Q02487 901 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 GAS6Q14393 721 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 HSF5Q4G112 596 aaPredicted RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 C9orf64Q5T6V5 341 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 ARHGEF18Q6ZSZ5 1173 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 CEP112Q8N8E3 955 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 CHST14Q8NCH0 376 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 SEMA3CQ99985 751 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 PCYOX1Q9UHG3 505 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 RSPH14Q9UHP6 348 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 EVLQ9UI08 416 aaPredicted RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 MMP17Q9ULZ9 603 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 OPHN1O60890 802 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 GCATO75600 419 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 GKP32189 559 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 MRPS25P82663 173 aaKnown RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 DR1Q01658 176 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 STARD3Q14849 445 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 P3H1Q32P28 736 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 EOGTQ5NDL2 527 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 KIAA1211LQ6NV74 962 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 CLDN23Q96B33 292 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 GLOD4Q9HC38 313 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 SCUBE2Q9NQ36 999 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 PRSS16Q9NQE7 514 aa27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 FEZ2Q9UHY8 353 aaPredicted RBP27.63■■■□□ 2.01
CHMP4B-201ENST00000217402 INSIG1O15503 277 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 GAS8O95995 478 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 COL9A1P20849 921 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 ACTN2P35609 894 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 VPS41P49754 854 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 ITPRIPL1Q6GPH6 555 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 STK40Q8N2I9 435 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 GRIN3AQ8TCU5 1115 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 RUNDC3BQ96NL0 473 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 GBA3Q9H227 469 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 ZDHHC6Q9H6R6 413 aa27.62■■■□□ 2.01
CHMP4B-201ENST00000217402 TARSL2A2RTX5 802 aaKnown RBP27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 PI15O43692 258 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 KRT14P02533 472 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 CR2P20023 1033 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 NSUN2Q08J23 767 aaKnown RBP eCLIP27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 NIPAL4Q0D2K0 466 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 PPP1R7Q15435 360 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 SRLQ86TD4 932 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 NUDCD1Q96RS6 583 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 CHRDQ9H2X0 955 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 NOD2Q9HC29 1040 aa27.61■■■□□ 2.01
CHMP4B-201ENST00000217402 A0A1W2PQF6 199 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 CHURC1-FNTBB4DL54 471 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 PSMB4P28070 264 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 RPL22P35268 128 aaKnown RBP27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 PTGIRP43119 386 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 RPS9P46781 194 aaKnown RBP27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 MYLK3Q32MK0 819 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 ALG1LQ6GMV1 187 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 ARRDC2Q8TBH0 407 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 PCDH9Q9HC56 1237 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 C2orf42Q9NWW7 574 aa27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 FARP1Q9Y4F1 1045 aaPredicted RBP27.6■■■□□ 2.01
CHMP4B-201ENST00000217402 TTI1O43156 1089 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 ATG13O75143 517 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 CD86P42081 329 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 CAMK2GQ13555 558 aaPredicted RBP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 ELAVL3Q14576 367 aaKnown RBP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 FAXCQ5TGI0 409 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 TMEM92Q6UXU6 159 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 CACUL1Q86Y37 369 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 PLPP6Q8IY26 295 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 SPATA22Q8NHS9 363 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 OR8D1Q8WZ84 308 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 SLCO2A1Q92959 643 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 NSMCE3Q96MG7 304 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 RBM15Q96T37 977 aaKnown RBP eCLIP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 SLC25A51Q9H1U9 297 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 RRAGDQ9NQL2 400 aaPredicted RBP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 UBP1Q9NZI7 540 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 METTL18O95568 372 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 AOC1P19801 751 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 DHX34Q14147 1143 aaKnown RBP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 JAMLQ86YT9 394 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 NOA1Q8NC60 698 aaKnown RBP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 LRRN4CLQ8ND94 238 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 IMP4Q96G21 291 aaKnown RBP27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 HEPHQ9BQS7 1158 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 EPHX3Q9H6B9 360 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 PAK5Q9P286 719 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 IL36AQ9UHA7 158 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 NEU2Q9Y3R4 380 aa27.59■■■□□ 2.01
CHMP4B-201ENST00000217402 TNFRSF10AO00220 468 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 PIGNO95427 931 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 POP4O95707 220 aaKnown RBP27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms