RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 CAAP1Q9H8G2 361 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 VRTNQ9H8Y1 702 aa15.28■□□□□ 0.04
EFNB1-201ENST00000204961 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
EFNB1-201ENST00000204961 C15orf38-AP3S2A0A0A6YYH1 394 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 SAC3D1A6NKF1 404 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 PIRO00625 290 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 SIX3O95343 332 aaPredicted RBP15.27■□□□□ 0.04
EFNB1-201ENST00000204961 CCDC166P0CW27 439 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 CKMT2P17540 419 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 SLC1A2P43004 574 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 ACADSBP45954 432 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 ECT2LQ008S8 904 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 FOXD4Q12950 439 aaPredicted RBP15.27■□□□□ 0.04
EFNB1-201ENST00000204961 DDR2Q16832 855 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 GNASQ5JWF2 1037 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 STRADAQ7RTN6 431 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 ARPINQ7Z6K5 226 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 PDCD6IPQ8WUM4 868 aaKnown RBP15.27■□□□□ 0.04
EFNB1-201ENST00000204961 HEXDCQ8WVB3 486 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 PPP2R3CQ969Q6 453 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 DCUN1D1Q96GG9 259 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 CDYLQ9Y232 598 aa15.27■□□□□ 0.04
EFNB1-201ENST00000204961 ZNF195O14628 629 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 CD4P01730 458 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 CDH15P55291 814 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 DAOAP59103 153 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 TIGD5Q53EQ6 642 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 BLOC1S5Q8TDH9 187 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 MPP4Q96JB8 637 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.03
EFNB1-201ENST00000204961 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 BTRCQ9Y297 605 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 PCDHB12Q9Y5F1 795 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 UBA6A0AVT1 1052 aaPredicted RBP15.27■□□□□ 0.03
EFNB1-201ENST00000204961 STMN1P16949 149 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 CAPRIN1Q14444 709 aaKnown RBP15.27■□□□□ 0.03
EFNB1-201ENST00000204961 PTPRRQ15256 657 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 MTX3Q5HYI7 312 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 C14orf80Q86SX3 495 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 UNC93AQ86WB7 457 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 DDIASQ8IXT1 998 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 NAT16Q8N8M0 369 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 NUDT8Q8WV74 236 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 CIB1Q99828 191 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.03
EFNB1-201ENST00000204961 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.03
EFNB1-201ENST00000204961 DOCK1Q14185 1865 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 MYADML2A6NDP7 307 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 PTK2BQ14289 1009 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 FAM187BQ17R55 369 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 DUSP28Q4G0W2 176 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 SPANXN3Q5MJ09 141 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 IL23RQ5VWK5 629 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 EPGNQ6UW88 154 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 RBM44Q6ZP01 1051 aaKnown RBP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 PDZD4Q76G19 769 aaPredicted RBP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 CRYBG2Q8N1P7 616 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 BRI3BPQ8WY22 251 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 CENPIQ92674 756 aaPredicted RBP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 LRCH3Q96II8 777 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 HSFY1Q96LI6 401 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 WDR6Q9NNW5 1121 aaKnown RBP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 UBAP1Q9NZ09 502 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 ST3GAL5Q9UNP4 418 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 ANKRD33BA6NCL7 494 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 DCLK1O15075 740 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 HDAC3O15379 428 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 COG7P83436 770 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 NSUN2Q08J23 767 aaKnown RBP eCLIP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 LIN52Q52LA3 116 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 TRIM67Q6ZTA4 783 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 PDSS2Q86YH6 399 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 TXNDC5Q8NBS9 432 aaKnown RBP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 ABTB1Q969K4 478 aaPredicted RBP15.26■□□□□ 0.03
EFNB1-201ENST00000204961 HDAC11Q96DB2 347 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 KCNA7Q96RP8 456 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 SLC39A8Q9C0K1 460 aa15.26■□□□□ 0.03
EFNB1-201ENST00000204961 ZNF839A8K0R7 811 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 SLC35E2BP0CK96 405 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 ZBTB6Q15916 424 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 BTBD8Q5XKL5 378 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 ZC3HC1Q86WB0 502 aaKnown RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 LILRA2Q8N149 483 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 LRRC52Q8N7C0 313 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 LRTOMTQ8WZ04 291 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 ARHGEF38Q9NXL2 777 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 SH3BP1Q9Y3L3 701 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 COPG1Q9Y678 874 aaKnown RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 AP4B1Q9Y6B7 739 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 ERI2A8K979 691 aaKnown RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 FKBP6O75344 327 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 TIPRLO75663 272 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 UQCRBP14927 111 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 CD86P42081 329 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 CDKL1Q00532 357 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 GPR158Q5T848 1215 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 LRRTM3Q86VH5 581 aa15.25■□□□□ 0.03
EFNB1-201ENST00000204961 CENPLQ8N0S6 344 aaPredicted RBP15.25■□□□□ 0.03
EFNB1-201ENST00000204961 FCRL2Q96LA5 508 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms