RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 MIPEPQ99797 713 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MCMBPQ9BTE3 642 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 TTPALQ9BTX7 342 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ACE2Q9BYF1 805 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 NACA2Q9H009 215 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MMADHCQ9H3L0 296 aaPredicted RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 ATXN3LQ9H3M9 355 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 NOL6Q9H6R4 1146 aaKnown RBP8.37□□□□□ -1.07
VAMP3-201ENST00000054666 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
VAMP3-201ENST00000054666 MYLKQ15746 1914 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 PHGDHO43175 533 aaKnown RBP8.36□□□□□ -1.07
VAMP3-201ENST00000054666 CNTN5O94779 1100 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 KLHL2O95198 593 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 TBX18O95935 607 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 CRABP2P29373 138 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 OR1E1P30953 314 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 CD86P42081 329 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 CHRNA4P43681 627 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 HARS2P49590 506 aaKnown RBP8.36□□□□□ -1.07
VAMP3-201ENST00000054666 PRMT2P55345 433 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 MAXP61244 160 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 MPP1Q00013 466 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 IL10RBQ08334 325 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 ZNF235Q14590 738 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 RTP2Q5QGT7 225 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 WLSQ5T9L3 541 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 C6orf163Q5TEZ5 329 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 LIPMQ5VYY2 423 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 KDELC1Q6UW63 502 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 RANBP10Q6VN20 620 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 ZYG11AQ6WRX3 759 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 SLC41A1Q8IVJ1 513 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 DENND6AQ8IWF6 608 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 FAM126BQ8IXS8 530 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 BBS5Q8N3I7 341 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 GPATCH11Q8N954 259 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 SH3TC2Q8TF17 1288 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 PSMG2Q969U7 264 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 ELMO2Q96JJ3 720 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 KLHL5Q96PQ7 755 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 RANBP9Q96S59 729 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 SORT1Q99523 831 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 EBF4Q9BQW3 602 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 CADM1Q9BY67 442 aaKnown RBP8.36□□□□□ -1.07
VAMP3-201ENST00000054666 RNPEPL1Q9HAU8 725 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 TREX1Q9NSU2 369 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 L3MBTL1Q9Y468 752 aa8.36□□□□□ -1.07
VAMP3-201ENST00000054666 A0A087X1B8 175 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CAPN14A8MX76 684 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 NT5C1B-RDH14C9J2C7 533 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 J3KR12 359 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TK2O00142 265 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 KIF3CO14782 793 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 DIAPH2O60879 1101 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 SIN3BO75182 1162 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 IGLV3-27P01718 113 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 AHSGP02765 367 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ALOX15P16050 662 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 GMPRP36959 345 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 AVPR1AP37288 418 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CPA2P48052 419 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ARCN1P48444 511 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 YBEYP58557 167 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 KDSRQ06136 332 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 SLC10A7Q0GE19 358 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 DUSP4Q13115 394 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CTBP1Q13363 440 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CNGA3Q16281 694 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ARTNQ5T4W7 220 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TMCO4Q5TGY1 634 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 SNX30Q5VWJ9 437 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 LRRC8EQ6NSJ5 796 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 RINLQ6ZS11 566 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TMPRSS6Q8IU80 811 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 C2CD4AQ8NCU7 369 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PDZD8Q8NEN9 1154 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 NUDCD1Q96RS6 583 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 POLR1EQ9GZS1 481 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CDH19Q9H159 772 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ARNT2Q9HBZ2 717 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CPSF2Q9P2I0 782 aaKnown RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 SLC2A6Q9UGQ3 507 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 FBXO5Q9UKT4 447 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ACOT9Q9Y305 439 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 DRGXA6NNA5 263 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 SLC38A8A6NNN8 435 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PRR5-ARHGAP8B1AHC4 643 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 B2RBV5 119 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 G3V2L1 256 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 GSC2O15499 205 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 CIB2O75838 187 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PAPSS2O95340 614 aaPredicted RBP8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PEX11BO96011 259 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 GALTP07902 379 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 SLC35E2BP0CK96 405 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 AOC1P19801 751 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 TACR2P21452 398 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 ARNTP27540 789 aa8.35□□□□□ -1.07
VAMP3-201ENST00000054666 PGM1P36871 562 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms