RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 UGP2Q16851 508 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 RNF187Q5TA31 235 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 UBE2Q1Q7Z7E8 422 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF354CQ86Y25 554 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 FAM217AQ8IXS0 508 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 BBS5Q8N3I7 341 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 PTPRN2Q92932 1015 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 FEM1CQ96JP0 617 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF778Q96MU6 729 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 MGME1Q9BQP7 344 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 IL1RAPL1Q9NZN1 696 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 INSL6Q9Y581 213 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 A0A0D9SEW6 157 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 GREM1O60565 184 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 MPOP05164 745 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 PFKLP17858 780 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ARNTP27540 789 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 CHRNA4P43681 627 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 MAXP61244 160 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ITKQ08881 620 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 CCDC15Q0P6D6 951 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ZNF235Q14590 738 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 FSTL4Q6MZW2 842 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 Q6ZNB5 142 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 NLRP9Q7RTR0 991 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 DCLK2Q8N568 766 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 GBP7Q8N8V2 638 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 CCDC63Q8NA47 563 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ARMC2Q8NEN0 867 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 SP7Q8TDD2 431 aaPredicted RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 PSKH2Q96QS6 385 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 GPR22Q99680 433 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 RHOJQ9H4E5 214 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 SNX15Q9NRS6 342 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 IARS2Q9NSE4 1012 aaKnown RBP14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 SEPT3Q9UH03 358 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 IRAK3Q9Y616 596 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 ANAPC1Q9H1A4 1944 aa14.49□□□□□ -0.09
RTFDC1-201ENST00000023939 WDR91A4D1P6 747 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 TGM5O43548 720 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 FSBPO95073 299 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 BPGMP07738 259 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 RHOCP08134 193 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 ATXN1LP0C7T5 689 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 MBL2P11226 248 aaPredicted RBP14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 HLA-DPA1P20036 260 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 CES1P23141 567 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 DNAJB1P25685 340 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 TYK2P29597 1187 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 OXCT1P55809 520 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 LAMB3Q13751 1172 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 FYB2Q5VWT5 728 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 ESRP1Q6NXG1 681 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 KIAA0408Q6ZU52 694 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 CCDC149Q6ZUS6 474 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 ZC3HC1Q86WB0 502 aaKnown RBP14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 OR7D4Q8NG98 312 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 OR52K2Q8NGK3 314 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 ADAMTS19Q8TE59 1207 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 PEX13Q92968 403 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 WBP2Q969T9 261 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 VPS39Q96JC1 886 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 SEMA3CQ99985 751 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 FAM167BQ9BTA0 163 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 TSSK1BQ9BXA7 367 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 LRRC3Q9BY71 257 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 EMCNQ9ULC0 261 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 LZTS1Q9Y250 596 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 USH1CQ9Y6N9 552 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 PLXNA4Q9HCM2 1894 aa14.48□□□□□ -0.09
RTFDC1-201ENST00000023939 MROH6A6NGR9 719 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 MUSKO15146 869 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 PLIN3O60664 434 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 GSRP00390 522 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 BGNP21810 368 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 SMAD3P84022 425 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 PCSK7Q16549 785 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 GALNTL6Q49A17 601 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 TSTD2Q5T7W7 516 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 ATG16L1Q676U5 607 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 IL31Q6EBC2 164 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 CXorf57Q6NSI4 855 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 GALNT7Q86SF2 657 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 CLEC14AQ86T13 490 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 TMC8Q8IU68 726 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 C10orf82Q8WW14 230 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 C7orf26Q96N11 449 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 UBA2Q9UBT2 640 aaPredicted RBP14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 RIMKLBQ9ULI2 386 aa14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 MTO1Q9Y2Z2 717 aaKnown RBP14.47□□□□□ -0.09
RTFDC1-201ENST00000023939 ZBBXA8MT70 800 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ANKRD65E5RJM6 399 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 VAPBO95292 243 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 FGF1P05230 155 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 ADH1AP07327 375 aa14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 HSPA1AP0DMV8 641 aaKnown RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 HSPA1BP0DMV9 641 aaKnown RBP14.46□□□□□ -0.09
RTFDC1-201ENST00000023939 TROVE2P10155 538 aaKnown RBP eCLIP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms