RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TRPC4Q9UBN4 977 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 SUFUQ9UMX1 484 aa10.47□□□□□ -0.73
NIPAL3-201ENST00000003912 RGS14O43566 566 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 SEC22BO75396 215 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC20A2Q08357 652 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 NPY5RQ15761 445 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 SPDYCQ5MJ68 293 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 AADACL2Q6P093 401 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 KYAT3Q6YP21 454 aaKnown RBP10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 CENPLQ8N0S6 344 aaPredicted RBP10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 RBFAQ8N0V3 343 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 KLHL5Q96PQ7 755 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 CSPG4P5Q96PW8 444 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 BBS4Q96RK4 519 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 MAGEH1Q9H213 219 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 ZDHHC4Q9NPG8 344 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 KLHL28Q9NXS3 571 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 EFR3BQ9Y2G0 817 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 NR5A2O00482 541 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 FLT3P36888 993 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 MAGEA9P43362 315 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 PSMD8P48556 350 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 SLC1A6P48664 564 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 GPR15P49685 360 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 IRF8Q02556 426 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 CNGA3Q16281 694 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 FEM1CQ96JP0 617 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 DACH2Q96NX9 599 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 DMAC2Q9NW81 257 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 COMMD8Q9NX08 183 aa10.46□□□□□ -0.73
NIPAL3-201ENST00000003912 KCNU1A8MYU2 1149 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 ETS1P14921 441 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 DGKGP49619 791 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 NME5P56597 212 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 FAAP100Q0VG06 881 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 FLOT2Q14254 428 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 PTPRNQ16849 979 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 FBXO46Q6PJ61 603 aaPredicted RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 P2RY11Q96G91 374 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 POLMQ9NP87 494 aaPredicted RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 NDRG2Q9UN36 371 aaKnown RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 LRRC72A6NJI9 287 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 CCT8L1PA6NM43 557 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 FSCN2O14926 492 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 RNASEH2AO75792 299 aaKnown RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 PSMA4P25789 261 aaKnown RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 TLX1P31314 330 aaPredicted RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 RPA3P35244 121 aaPredicted RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 VEGFBP49765 207 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 LBX1P52954 281 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 DAOAP59103 153 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 ZCCHC8Q6NZY4 707 aaKnown RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 RFWD3Q6PCD5 774 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 EIF1ADQ8N9N8 165 aaKnown RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 FNDC5Q8NAU1 212 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 ANKRD7Q92527 254 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 POMKQ9H5K3 350 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 AGO3Q9H9G7 860 aaKnown RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 GDF3Q9NR23 364 aa10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 FBXO6Q9NRD1 293 aaPredicted RBP10.46□□□□□ -0.74
NIPAL3-201ENST00000003912 CRYBG1Q9Y4K1 1723 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 C16orf96A6NNT2 1141 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ANKRD65E5RJM6 399 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 L1CAMP32004 1257 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 GUCA1AP43080 201 aaPredicted RBP10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 IRAK1P51617 712 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 SEC24CP53992 1094 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 GNA12Q03113 381 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ACSM2AQ08AH3 577 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ACSM2BQ68CK6 577 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 TMC5Q6UXY8 1006 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 UNC5AQ6ZN44 842 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 MON1BQ7L1V2 547 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 COLGALT2Q8IYK4 626 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 OR4L1Q8NH43 312 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 GLMNQ92990 594 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 MYOCQ99972 504 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 BLOC1S6Q9UL45 172 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 TMCC3Q9ULS5 477 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 SNX8Q9Y5X2 465 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ZFP37Q9Y6Q3 630 aaPredicted RBP10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 URADA6NGE7 173 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 TFE3P19532 575 aaPredicted RBP10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 LMO2P25791 158 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 DDX6P26196 483 aaKnown RBP eCLIP10.45□□□□□ -0.745e-6■■■■■ 46.6
NIPAL3-201ENST00000003912 HPCAL1P37235 193 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ZCWPW2Q504Y3 356 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 WDR48Q8TAF3 677 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 TRIB2Q92519 343 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ZFYVE1Q9HBF4 777 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 THAP1Q9NVV9 213 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 CNTN3Q9P232 1028 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 WRAP73Q9P2S5 460 aaPredicted RBP10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 ENTPD4Q9Y227 616 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 MYO1CO00159 1063 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 PHGDHO43175 533 aaKnown RBP10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 UGT2B4P06133 528 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 FSHRP23945 695 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 RRM2P31350 389 aa10.45□□□□□ -0.74
NIPAL3-201ENST00000003912 TEX44Q53QW1 395 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms