RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Pgam1Q9DBJ1 254 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Spry1Q9QXV9 313 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Clec4aQ9QZ15 238 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Rfwd2Q9R1A8 733 aaKnown RBP23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Prr22F6TNE3 422 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Akain1G3UWD5 69 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Zfp1P08042 402 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Icam1P13597 537 aaKnown RBP23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Adrb1P34971 466 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Tnfrsf4P47741 272 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Hspa4lP48722 838 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 MipP51180 263 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Fam207aP58468 219 aaKnown RBP23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Shox2P70390 331 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 StacP97306 403 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Zyg11bQ3UFS0 744 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Arhgap44Q5SSM3 814 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Znf148Q61624 794 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Smad2Q62432 467 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Tmem164Q6PHN7 296 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Far2Q7TNT2 515 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 NaprtQ8CC86 538 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ccdc63Q8CDV6 558 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ggt7Q99JP7 662 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Susd3Q9D176 269 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Cdkn2aipnlQ9D211 116 aaKnown RBP23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Mfsd10Q9D2V8 456 aaKnown RBP23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Copg2Q9QXK3 871 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Serpinb6cW4VSP4 379 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Myo10F8VQB6 2062 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Acnat1A2AKK5 416 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 VimP20152 466 aaKnown RBP23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Tubgcp3P58854 905 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Rftn1Q6A0D4 554 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Gm5414Q6IFZ8 552 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Adam29Q811Q4 763 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 RalylQ8BTF8 293 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Pcyox1lQ8C7K6 495 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Tasp1Q8R1G1 420 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Setd7Q8VHL1 366 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 GzmnQ920S1 248 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Gprc5bQ923Z0 410 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Aco2Q99KI0 780 aaKnown RBP23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Grk2Q99MK8 689 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Hes6Q9JHE6 224 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Pard6bQ9JK83 371 aa23■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Rad51ap2G3UW63 976 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 UmpsP13439 481 aaKnown RBP22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Wnt3aP27467 352 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Uba1yP31254 1058 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Kpna2P52293 529 aaKnown RBP22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Plk2P53351 682 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 PolgP54099 1218 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Rps24P62849 133 aaKnown RBP22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ptprn2P80560 1001 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Zdhhc18Q5Y5T2 380 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Lemd2Q6DVA0 511 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Sp140Q6NSQ5 534 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Bend7Q8BSV3 434 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Atg14Q8CDJ3 492 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ccdc17Q8CE13 565 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Mill2Q8HWE5 355 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Cplx3Q8R1B5 158 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ttc39cQ8VE09 580 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Olfr615Q8VGY4 313 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ndufs2Q91WD5 463 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 1700109H08RikQ9D9C0 210 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Tm9sf1Q9DBU0 606 aa22.99■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Fam171a2A2A699 822 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Itpripl1A2ASA8 547 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Speer4f2E9Q366 295 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Rab11fip2G3XA57 512 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ebf3O08791 596 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ifnar2O35664 513 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Hcn4O70507 1186 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 PigrO70570 771 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Crabp2P22935 138 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 TshrP47750 764 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Smad4P97471 551 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 MslnQ61468 625 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 SnrpaQ62189 287 aaKnown RBP22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Nomo1Q6GQT9 1214 aaKnown RBP22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Olfr213Q7TS32 327 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Spon2Q8BMS2 330 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Heatr3Q8BQM4 679 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Cpsf7Q8BTV2 471 aaKnown RBP22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ubr7Q8BU04 425 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Arhgap12Q8C0D4 838 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Pnpla8Q8K1N1 776 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ddx18Q8K363 660 aaKnown RBP22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Pitrm1Q8K411 1036 aaKnown RBP22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Rprd1aQ8VDS4 312 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Mlf2Q99KX1 247 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Atp6v1e2Q9D593 226 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Cyp2c55Q9D816 490 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Actn2Q9JI91 894 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Asb1Q9WV74 336 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Nme3Q9WV85 169 aa22.98■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Akap5D3YVF0 745 aa22.97■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Zfp780bE9Q2S6 806 aa22.97■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms