RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Vmn2r72D3Z4N8 856 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 BrafP28028 804 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Hoxc13P50207 328 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pdap1Q3UHX2 181 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Akr1clQ3UXL1 322 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pcdhga7Q6DD96 935 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 March4Q80TE3 409 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Lrrc27Q80YS5 523 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Disc1Q811T9 852 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Grk2Q99MK8 689 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tnfaip8l2Q9D8Y7 184 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 PolhQ9JJN0 694 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ruvbl2Q9WTM5 463 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm10720D3Z1I5 223 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Trim30bE9PVL6 203 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm10721J3QPJ9 223 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 PlaaP27612 794 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Stt3bQ3TDQ1 823 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Proser1Q5PRE5 913 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Sdf4Q61112 361 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Naaladl1Q7M758 745 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Olfr20Q7TRX9 314 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ago3Q8CJF9 860 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Mrpl57Q9CQF8 102 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ndufb5Q9CQH3 189 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Serbp1Q9CY58 407 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rnf225Q9D7D1 332 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Erap1Q9EQH2 930 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gpr63Q9EQQ3 425 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ccr10Q9JL21 362 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cyb561d2Q9WUE3 222 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Atrnl1Q6A051 1378 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm5145F8VQ88 278 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 XntrpcF8VQM8 1264 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 2610028H24RikG5E8K1 270 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Drg1P32233 367 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Psmb4P99026 264 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Bhlhe22Q8C6A8 355 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 PolbQ8K409 335 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Irak3Q8K4B2 609 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pcdhb11Q91UZ8 797 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 NgrnQ99KS2 293 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 CoprsQ9CQ13 173 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ndc80Q9D0F1 642 aaKnown RBP11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Echdc3Q9D7J9 300 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Hes6Q9JHE6 224 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Bace2Q9JL18 514 aa11□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cacna1bO55017 2327 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 9230113P08RikD3YWX3 137 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Akap10O88845 662 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nos2P29477 1144 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Smpdl3bP58242 456 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Fam20cQ5MJS3 579 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pnma8aQ80VM8 430 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Dhx33Q80VY9 698 aaKnown RBP10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 ChfrQ810L3 664 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 ClmnQ8C5W0 1052 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tfb1mQ8JZM0 345 aaKnown RBP10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Taf10Q8K0H5 218 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rell1Q8K2J7 272 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Epm2aip1Q8VEH5 606 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rmnd5bQ91YQ7 393 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Ttc30bQ9CY00 664 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Fam162aQ9D6U8 155 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Plscr1Q9JJ00 328 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Col22a1E9Q7P1 1613 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Greb1lB9EJV3 1913 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Gm13212B1ASQ7 799 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Vmn2r27D3YUK6 857 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 4930444G20RikD3Z741 495 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 ChrngP04760 519 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tbxas1P36423 533 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Prox1P48437 737 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 InhbcP55104 352 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 NficP70255 439 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Echdc2Q3TLP5 296 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Syce1lQ5D525 247 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 RhocQ62159 193 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Tbc1d12Q6A039 696 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Q6PAC4 1279 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Defb34Q7TNV8 81 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Rhbdf2Q80WQ6 827 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Alkbh8Q80Y20 664 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Spon2Q8BMS2 330 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Bmt2Q8BXK4 403 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Slc35f5Q8R314 524 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 B3galt6Q91Z92 325 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 DarsQ922B2 501 aaKnown RBP10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Trim16Q99PP9 556 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Acbd6Q9D061 282 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Leng1Q9DB98 261 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Dclre1aQ9JIC3 1026 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Akr1c12Q9JLI0 323 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Pld1Q9Z280 1074 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Cntnap4Q99P47 1310 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Kifc5bE9PUA5 672 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Vmn2r103E9PWW0 856 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Nccrp1G3X9C2 266 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 Crhr1P35347 415 aa10.99□□□□□ -0.65
Msh3-201ENSMUST00000022220 PuraP42669 321 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms