RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 NTPCRQ9BSD7 190 aaKnown RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 NPLQ9BXD5 320 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 ACE2Q9BYF1 805 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 EXD2Q9NVH0 621 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 OAZ3Q9UMX2 235 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 MAGED1Q9Y5V3 778 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 CLOCKO15516 846 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 PRDX6P30041 224 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 PTPN9P43378 593 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 RAD23AP54725 363 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 TRIM25Q14258 630 aaKnown RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 DUOXA2Q1HG44 320 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 FUT11Q495W5 492 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 PID1Q7Z2X4 250 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 EXOC8Q8IYI6 725 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 MCUQ8NE86 351 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 ARNTL2Q8WYA1 636 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 PHF21BQ96EK2 531 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF597Q96LX8 424 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 HIPK3Q9H422 1215 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 FANCEQ9HB96 536 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 TNFRSF12AQ9NP84 129 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 ITM2CQ9NQX7 267 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 CHRAC1Q9NRG0 131 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 PTGDR2Q9Y5Y4 395 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 ITGB3P05106 788 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ACAT1P24752 427 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 RABGGTBP53611 331 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF829Q3KNS6 432 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ZBED5Q49AG3 693 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF618Q5T7W0 954 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 IGFN1Q86VF2 1251 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PDZD8Q8NEN9 1154 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 HNRNPABQ99729 332 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PRPF19Q9UMS4 504 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 FAM32AQ9Y421 112 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 GPC6Q9Y625 555 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 EI24O14681 340 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ESRRBO95718 433 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 LSM8O95777 96 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 BACE1P56817 501 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 SP2Q02086 613 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 CLCQ05315 142 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 TMEM132BQ14DG7 1078 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 STXBP2Q15833 593 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 LY6KQ17RY6 165 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 KIZQ2M2Z5 673 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 CLEC6AQ6EIG7 209 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 BORAQ6PGQ7 559 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 A0A087WXM4 84 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PARNO95453 639 aaKnown RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PCNAP12004 261 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ATP6V1B2P21281 511 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 OXTRP30559 389 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 CXCR3P49682 368 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 GJA9P57773 515 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
SCARB2-227ENST00000640957 CLIP4Q8N3C7 705 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 CERS2Q96G23 380 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 OTUD5Q96G74 571 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ADI1Q9BV57 179 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PRDM8Q9NQV8 689 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 TBCCD1Q9NVR7 557 aa13.93□□□□□ -0.18
SCARB2-227ENST00000640957 PSMD11O00231 422 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 TRIM38O00635 465 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 SNAP29O95721 258 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 HSPA13P48723 471 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 STAT5BP51692 787 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 TPTEP56180 551 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 FKBP1AP62942 108 aaKnown RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 TAP1Q03518 808 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 CTBP1Q13363 440 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 USP10Q14694 798 aaKnown RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 IMPG1Q17R60 797 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 NHSL2Q5HYW2 709 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 ARHGAP17Q68EM7 881 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 ELMO1Q92556 727 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 DHX33Q9H6R0 707 aaKnown RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 GID8Q9NWU2 228 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 USP22Q9UPT9 525 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 GPC4O75487 556 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 TSHRP16473 764 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 EEF1DP29692 281 aaKnown RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF143P52747 638 aaPredicted RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 SNRPFP62306 86 aaKnown RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 TXNL4AP83876 142 aaKnown RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 PTPN11Q06124 597 aaPredicted RBP13.92□□□□□ -0.18
SCARB2-227ENST00000640957 GRM3Q14832 879 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF667Q5HYK9 610 aa13.92□□□□□ -0.18
SCARB2-227ENST00000640957 HABP4Q5JVS0 413 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms