RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 TWF1Q12792 350 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 DUSP6Q16828 381 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 CLEC16AQ2KHT3 1053 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 SPDYCQ5MJ68 293 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 GPR158Q5T848 1215 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 KRT73Q86Y46 540 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 TOR1AIP2Q8NFQ8 470 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 OR2W6PQ8NHA6 318 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 LNX1Q8TBB1 728 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 PRCCQ92733 491 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 GANQ9H2C0 597 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 RBM12Q9NTZ6 932 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 FBXW11Q9UKB1 542 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 FBXL21Q9UKT6 434 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MYBPHLA2RUH7 354 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MGRN1O60291 552 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MICAL2O94851 1124 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ASMTLO95671 621 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 LATS1O95835 1130 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 CCT3P49368 545 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 SOX4Q06945 474 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 TAF10Q12962 218 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 RNF220Q5VTB9 566 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 PAPD7Q5XG87 772 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 TMEM53Q6P2H8 277 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 SCML4Q8N228 414 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ZNF564Q8TBZ8 553 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 PCED1BQ96HM7 432 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MRPL45Q9BRJ2 306 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 MLPHQ9BV36 600 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 WDR12Q9GZL7 423 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 BRD9Q9H8M2 597 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 PHTF1Q9UMS5 762 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 FADS3Q9Y5Q0 445 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MYH11P35749 1972 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 A0A087WXM4 84 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 A0A0A6YYK5 440 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 A0A1W2PRG6 482 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 SLC38A8A6NNN8 435 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 RAD51BO15315 384 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 CHEK2O96017 543 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ATP5BP06576 529 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 ATF4P18848 351 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 SKIV2L2P42285 1042 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 PLIN5Q00G26 463 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 DNAJC3Q13217 504 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ZNF177Q13360 481 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 MESDQ14696 234 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 STARD3Q14849 445 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MIIPQ5JXC2 388 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 TTC39BQ5VTQ0 682 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 BSPRYQ5W0U4 402 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 STRADAQ7RTN6 431 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 RAB44Q7Z6P3 723 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 CELF5Q8N6W0 485 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 UBA3Q8TBC4 463 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MDM1Q8TC05 714 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 OSBPL6Q9BZF3 934 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 WDCPQ9H6R7 721 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 TAGLN3Q9UI15 199 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 TTC7AQ9ULT0 858 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 CNTN6Q9UQ52 1028 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 COLQQ9Y215 455 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 MGAMO43451 1857 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 EME2A4GXA9 379 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 MAN2B1O00754 1011 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 APOL1O14791 398 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 NDUFB5O43674 189 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 KITP10721 976 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 CLK1P49759 484 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 GATMP50440 423 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 MRPS5P82675 430 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 ADIGQ0VDE8 80 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 EIF2B5Q13144 721 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 PDK2Q15119 407 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ANO4Q32M45 955 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 LIN52Q52LA3 116 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 HABP4Q5JVS0 413 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 TCHHL1Q5QJ38 904 aaPredicted RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 LRRC8EQ6NSJ5 796 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 NEK5Q6P3R8 708 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 RNF19BQ6ZMZ0 732 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 PRPF39Q86UA1 669 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 SLC4A11Q8NBS3 891 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 LRRN4CLQ8ND94 238 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 CASKIN2Q8WXE0 1202 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ZNF516Q92618 1163 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 SEMA4DQ92854 862 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 PLD4Q96BZ4 506 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 PABPC5Q96DU9 382 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 ECSITQ9BQ95 431 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 GRIP2Q9C0E4 1043 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 DDX47Q9H0S4 455 aaKnown RBP5.76□□□□□ -1.49
RTTN-218ENST00000640408 OBP2AQ9NY56 170 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 SCN3BQ9NY72 215 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 ZNF232Q9UNY5 417 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 COQ6Q9Y2Z9 468 aa5.76□□□□□ -1.49
RTTN-218ENST00000640408 CENPXA8MT69 81 aa5.75□□□□□ -1.49
RTTN-218ENST00000640408 IRAK2O43187 625 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms