RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 LBX2Q6XYB7 198 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 MOB2Q70IA6 237 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 SEC14L1Q92503 715 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 LENG8Q96PV6 779 aaPredicted RBP16.84■□□□□ 0.29
SCARB2-210ENST00000638567 DUSP16Q9BY84 665 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 NR2E3Q9Y5X4 410 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 PTGES3LE9PB15 166 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 MDM4O15151 490 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 SQLEQ14534 574 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 RALGPS1Q5JS13 557 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 OR56A4Q8NGH8 313 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 TRPM4Q8TD43 1214 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 CD101Q93033 1021 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 VPS33AQ96AX1 596 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 RTKNQ9BST9 563 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 HGH1Q9BTY7 390 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 COLEC11Q9BWP8 271 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 MTFR1LQ9H019 292 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 NRCAMQ92823 1304 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 KRT8P05787 483 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 SLC26A9Q7LBE3 791 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 ATG16L2Q8NAA4 619 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 OTULINQ96BN8 352 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 EBF4Q9BQW3 602 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 ELOVL6Q9H5J4 265 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 ATP13A1Q9HD20 1204 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 ABCC13Q9NSE7 274 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 SERPIND1P05546 499 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 PIRTP0C851 137 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 NEK3P51956 506 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 CA9Q16790 459 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 SLC39A12Q504Y0 691 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 C9orf57Q5W0N0 161 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 CARNMT1Q8N4J0 409 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 QKIQ96PU8 341 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCARB2-210ENST00000638567 RMND5AQ9H871 391 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 FETUBQ9UGM5 382 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 TBX10O75333 385 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 CCT8P50990 548 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 CLCN5P51795 746 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 SLC7A2P52569 658 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 OGDHQ02218 1023 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 ZNF280DQ6N043 979 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 GPC2Q8N158 579 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 CCDC185Q8N715 623 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 RDH11Q8TC12 318 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 RAET1EQ8TD07 263 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 ASB2Q96Q27 587 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 ARHGEF4Q9NR80 690 aa16.83■□□□□ 0.29
SCARB2-210ENST00000638567 NKX1-2Q9UD57 310 aaPredicted RBP16.83■□□□□ 0.29
SCARB2-210ENST00000638567 METTL18O95568 372 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 VCLP18206 1134 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 HLA-DPA1P20036 260 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 CYP2C18P33260 490 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 SOAT1P35610 550 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ATXN1P54253 815 aaKnown RBP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ENPEPQ07075 957 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ARL13AQ5H913 290 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 PRAMEF19Q5SWL8 479 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 C9orf131Q5VYM1 1079 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 SCIMPQ6UWF3 145 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 GLT6D1Q7Z4J2 308 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 TEX12Q9BXU0 123 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 TLR8Q9NR97 1041 aaKnown RBP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ANAPC2Q9UJX6 822 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 PCDHB8Q9UN66 801 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 PCDHB5Q9Y5E4 795 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ZNF541Q9H0D2 1346 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 FGF10O15520 208 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 PRIM2P49643 509 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 GPX6P59796 221 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 RUNX1T1Q06455 604 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 KCTD21Q4G0X4 260 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 TEX44Q53QW1 395 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 TBCDQ9BTW9 1192 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 POLR1EQ9GZS1 481 aaKnown RBP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 PDZD7Q9H5P4 517 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 HMGXB4Q9UGU5 601 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ZMYM5Q9UJ78 669 aa16.83■□□□□ 0.28
SCARB2-210ENST00000638567 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-210ENST00000638567 TRAFD1O14545 582 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 LGR5O75473 907 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 HGFP14210 728 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ASPAP45381 313 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 POU5F1Q01860 360 aaKnown RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 MSS51Q4VC12 460 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ADCK2Q7Z695 626 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ZDHHC13Q8IUH4 622 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 TTC30BQ8N4P2 665 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ITFG1Q8TB96 612 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 TINF2Q9BSI4 451 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 BTRCQ9Y297 605 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 CPSF4O95639 269 aaKnown RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 HOXB8P17481 243 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 YWHAQP27348 245 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms