RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 DNA2P51530 1060 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 CLDN2P57739 230 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 C15orf59Q2T9L4 293 aaPredicted RBP18.82■□□□□ 0.6
CLN6-220ENST00000637450 ARL13BQ3SXY8 428 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 SOWAHCQ53LP3 525 aaPredicted RBP18.82■□□□□ 0.6
CLN6-220ENST00000637450 MANEALQ5VSG8 457 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 CDKAL1Q5VV42 579 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 GCNT7Q6ZNI0 430 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 PHLDB2Q86SQ0 1253 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 NLRP14Q86W24 1093 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 PLPP6Q8IY26 295 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 OR4C6Q8NH72 309 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 FAM174AQ8TBP5 190 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 ISG20Q96AZ6 181 aaKnown RBP18.82■□□□□ 0.6
CLN6-220ENST00000637450 LRIG1Q96JA1 1093 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 FEM1CQ96JP0 617 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 CALN1Q9BXU9 219 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 SLC17A9Q9BYT1 436 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 NRSN2Q9GZP1 204 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 VPS16Q9H269 839 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 NDFIP2Q9NV92 336 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 FCF1Q9Y324 198 aaKnown RBP18.82■□□□□ 0.6
CLN6-220ENST00000637450 FADS3Q9Y5Q0 445 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 ACTL7AQ9Y615 435 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 FASNP49327 2511 aaKnown RBP18.82■□□□□ 0.6
CLN6-220ENST00000637450 TP53BP1Q12888 1972 aaPredicted RBP18.82■□□□□ 0.6
CLN6-220ENST00000637450 BAHCC1Q9P281 2608 aa18.82■□□□□ 0.6
CLN6-220ENST00000637450 C2CD4BA6NLJ0 364 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 AP1G1O43747 822 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 SDC4P31431 198 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 SOX5P35711 763 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 ACVRL1P37023 503 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 ETFBP38117 255 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 CCNHP51946 323 aaPredicted RBP18.81■□□□□ 0.6
CLN6-220ENST00000637450 JAM2P57087 298 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 POLR2FP61218 127 aaKnown RBP18.81■□□□□ 0.6
CLN6-220ENST00000637450 RPS21P63220 83 aaKnown RBP18.81■□□□□ 0.6
CLN6-220ENST00000637450 FGL2Q14314 439 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 RTP5Q14D33 572 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 KRT31Q15323 416 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 CDO1Q16878 200 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 KIAA1161Q6NSJ0 714 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 Q6ZSR6 202 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 DCP2Q8IU60 420 aaKnown RBP18.81■□□□□ 0.6
CLN6-220ENST00000637450 SLC22A18ASQ8N1D0 253 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 JOSD2Q8TAC2 188 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 SLC30A5Q8TAD4 765 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 CENPIQ92674 756 aaPredicted RBP18.81■□□□□ 0.6
CLN6-220ENST00000637450 IFT43Q96FT9 208 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 BMFQ96LC9 184 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 HECAQ9UBI9 543 aaPredicted RBP18.81■□□□□ 0.6
CLN6-220ENST00000637450 ASXL3Q9C0F0 2248 aa18.81■□□□□ 0.6
CLN6-220ENST00000637450 FAM72CH0Y354 149 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 EPHB6O15197 1021 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 PIAS2O75928 621 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 PAK4O96013 591 aaPredicted RBP18.8■□□□□ 0.6
CLN6-220ENST00000637450 GIMD1P0DJR0 217 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 RHOQP17081 205 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 PTPN9P43378 593 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 MAPKAPK2P49137 400 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 E2F1Q01094 437 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 INSM1Q01101 510 aaPredicted RBP18.8■□□□□ 0.6
CLN6-220ENST00000637450 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
CLN6-220ENST00000637450 FAM72AQ5TYM5 149 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 FAM72DQ6L9T8 149 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 RWDD4Q6NW29 188 aaKnown RBP18.8■□□□□ 0.6
CLN6-220ENST00000637450 STRADAQ7RTN6 431 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 FAM72BQ86X60 149 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 GPT2Q8TD30 523 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 ARHGEF2Q92974 986 aaKnown RBP18.8■□□□□ 0.6
CLN6-220ENST00000637450 C11orf70Q9BRQ4 267 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 MAGEB5Q9BZ81 275 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 CAAP1Q9H8G2 361 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 GPR27Q9NS67 375 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 FAM207AQ9NSI2 230 aaPredicted RBP18.8■□□□□ 0.6
CLN6-220ENST00000637450 TMEM248Q9NWD8 314 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 AK5Q9Y6K8 562 aa18.8■□□□□ 0.6
CLN6-220ENST00000637450 A6NNZ2 444 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 GJB6O95452 261 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 PLEKP08567 350 aaPredicted RBP18.79■□□□□ 0.6
CLN6-220ENST00000637450 UNGP13051 313 aaPredicted RBP18.79■□□□□ 0.6
CLN6-220ENST00000637450 SEMG2Q02383 582 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 PTP4A2Q12974 167 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 HS1BP3Q53T59 392 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 TRIM72Q6ZMU5 477 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 PARS2Q7L3T8 475 aaKnown RBP18.79■□□□□ 0.6
CLN6-220ENST00000637450 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 DCBLD1Q8N8Z6 715 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 PCDHB18PQ96TA0 734 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 TM6SF2Q9BZW4 377 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 MAGEH1Q9H213 219 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 ZDHHC6Q9H6R6 413 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 LMBRD1Q9NUN5 540 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 NEU3Q9UQ49 428 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 CLCA2Q9UQC9 943 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 DAAM1Q9Y4D1 1078 aa18.79■□□□□ 0.6
CLN6-220ENST00000637450 POM121BA6NF01 834 aa18.78■□□□□ 0.6
CLN6-220ENST00000637450 C16orf96A6NNT2 1141 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms