RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 CASS4Q9NQ75 786 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 SPHK2Q9NRA0 654 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 KIAA1522Q9P206 1035 aaPredicted RBP15.6■□□□□ 0.09
CLN6-219ENST00000637329 FETUBQ9UGM5 382 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 VPS28Q9UK41 221 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 TTLL3Q9Y4R7 772 aa15.6■□□□□ 0.09
CLN6-219ENST00000637329 DENND4AQ7Z401 1863 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 TCF20Q9UGU0 1960 aaKnown RBP15.59■□□□□ 0.09
CLN6-219ENST00000637329 F5H423 210 aaPredicted RBP15.59■□□□□ 0.09
CLN6-219ENST00000637329 ZMPSTE24O75844 475 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 SYF2O95926 243 aaKnown RBP15.59■□□□□ 0.09
CLN6-219ENST00000637329 STX2P32856 288 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 CSKP41240 450 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 ELK3P41970 407 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 PLK1P53350 603 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 ADAM15Q13444 863 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 RALGPS1Q5JS13 557 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 SYCP2LQ5T4T6 812 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 SYCE2Q6PIF2 218 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 GET4Q7L5D6 327 aaPredicted RBP15.59■□□□□ 0.09
CLN6-219ENST00000637329 OTOP3Q7RTS5 596 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 FGF13Q92913 245 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 IRF7Q92985 503 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 E2F7Q96AV8 911 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 ALG14Q96F25 216 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 SIGLEC10Q96LC7 697 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 EBNA1BP2Q99848 306 aaKnown RBP15.59■□□□□ 0.09
CLN6-219ENST00000637329 TBL1YQ9BQ87 522 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 SPON2Q9BUD6 331 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 CINPQ9BW66 212 aaPredicted RBP15.59■□□□□ 0.09
CLN6-219ENST00000637329 FSD1LQ9BXM9 530 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 SLC2A11Q9BYW1 496 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 EPHX3Q9H6B9 360 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 VPS37BQ9H9H4 285 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 LRRC4CQ9HCJ2 640 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 CHMP2BQ9UQN3 213 aa15.59■□□□□ 0.09
CLN6-219ENST00000637329 NUP205Q92621 2012 aa15.58■□□□□ 0.09
CLN6-219ENST00000637329 PIEZO1Q92508 2521 aa15.58■□□□□ 0.09
CLN6-219ENST00000637329 SDR42E2A6NKP2 422 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 CBX4O00257 560 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 LINC01565O15544 149 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 GPR37L1O60883 481 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 BANF1O75531 89 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 SHBGP04278 402 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 POU3F3P20264 500 aaPredicted RBP15.58■□□□□ 0.08
CLN6-219ENST00000637329 ADRA1AP35348 466 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 NPY2RP49146 381 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 ARF5P84085 180 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 DMC1Q14565 340 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 COL19A1Q14993 1142 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 RASA2Q15283 850 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 KLHL38Q2WGJ6 581 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 KRT71Q3SY84 523 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 FSCBQ5H9T9 825 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 STEAP4Q687X5 459 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 CES5AQ6NT32 575 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 RETSATQ6NUM9 610 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 KDELC1Q6UW63 502 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 TPGS1Q6ZTW0 290 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 ANKMY2Q8IV38 441 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 PALM2Q8IXS6 379 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 CNPY4Q8N129 248 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 OR2W6PQ8NHA6 318 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 WFDC5Q8TCV5 224 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 OSCP1Q8WVF1 389 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 STAMBPL1Q96FJ0 436 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 PGM2Q96G03 612 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 RIPOR3Q96MK2 946 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 IL22Q9GZX6 179 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 STMN4Q9H169 189 aaPredicted RBP15.58■□□□□ 0.08
CLN6-219ENST00000637329 ACSS3Q9H6R3 686 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 BFARQ9NZS9 450 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 ZC3H7BQ9UGR2 993 aaKnown RBP15.58■□□□□ 0.08
CLN6-219ENST00000637329 VPS51Q9UID3 782 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 CDH7Q9ULB5 785 aa15.58■□□□□ 0.08
CLN6-219ENST00000637329 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.58■□□□□ 0.08
CLN6-219ENST00000637329 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 HMGB1P1B2RPK0 211 aaPredicted RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 H3BQF6 201 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 HOXC11O43248 304 aaPredicted RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 AVILO75366 819 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 ADH1CP00326 375 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 PGAM1P18669 254 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 MZF1P28698 734 aaPredicted RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 GRIA1P42261 906 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 GPX6P59796 221 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 LMAN2Q12907 356 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 CBX2Q14781 532 aaPredicted RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 CTC1Q2NKJ3 1217 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 PLEKHG6Q3KR16 790 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 FAM78AQ5JUQ0 283 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 FAM182AQ5T1J6 154 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 UBAP2Q5T6F2 1119 aaKnown RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 AGBL2Q5U5Z8 902 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 ZNF449Q6P9G9 518 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 POTEHQ6S545 545 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 PRPF39Q86UA1 669 aaKnown RBP15.57■□□□□ 0.08
CLN6-219ENST00000637329 TDRPQ86YL5 185 aa15.57■□□□□ 0.08
CLN6-219ENST00000637329 AGGF1Q8N302 714 aaeCLIP15.57■□□□□ 0.08
CLN6-219ENST00000637329 MICALL1Q8N3F8 863 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms