RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 HECAQ9UBI9 543 aaPredicted RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 AP4E1Q9UPM8 1137 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 NEU3Q9UQ49 428 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 FNDC3AQ9Y2H6 1198 aaKnown RBP14.07□□□□□ -0.16
PNKP-228ENST00000637325 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.07□□□□□ -0.162e-11■■■□□ 16.1
PNKP-228ENST00000637325 ACTL7AQ9Y615 435 aa14.07□□□□□ -0.16
PNKP-228ENST00000637325 CXorf51AA0A1B0GTR3 108 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 EEF2KO00418 725 aaKnown RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 KCNK3O14649 394 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 DAPK3O43293 454 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 CBFA2T2O43439 604 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 PRPSAP2O60256 369 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 RNGTTO60942 597 aaKnown RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 ZNF821O75541 412 aaPredicted RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 HTR7P34969 479 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 YBEYP58557 167 aaPredicted RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 SNRPD1P62314 119 aaKnown RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 SETMARQ53H47 684 aaPredicted RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 ERMARDQ5T6L9 678 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 LEKR1Q6ZMV7 388 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 ERN2Q76MJ5 926 aaKnown RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 FNIP1Q8TF40 1166 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 FAM131CQ96AQ9 280 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 ISG20Q96AZ6 181 aaKnown RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 CAMK1GQ96NX5 476 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 XPO4Q9C0E2 1151 aaKnown RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 TSPY26PQ9H489 355 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 ZDHHC6Q9H6R6 413 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 WASF2Q9Y6W5 498 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 CHD8Q9HCK8 2581 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 KNTC1P50748 2209 aa14.06□□□□□ -0.16
PNKP-228ENST00000637325 ARID1BQ8NFD5 2236 aaPredicted RBP14.06□□□□□ -0.16
PNKP-228ENST00000637325 WASH4PA8MWX3 477 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 EIF3CLB5ME19 914 aaKnown RBP14.05□□□□□ -0.16
PNKP-228ENST00000637325 RASA4BC9J798 803 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 RASA4O43374 803 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 LATO43561 262 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 DFNA5O60443 496 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 PCDH8O95206 1070 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 CD160O95971 181 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 MIPP30301 263 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 CTSKP43235 329 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 CCT8P50990 548 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 NEK3P51956 506 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 STAT4Q14765 748 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 TRIP6Q15654 476 aaKnown RBP14.05□□□□□ -0.16
PNKP-228ENST00000637325 PARP15Q460N3 678 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 KCNT1Q5JUK3 1230 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 PIP5KL1Q5T9C9 394 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 HGSNATQ68CP4 663 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 NAPEPLDQ6IQ20 393 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 NEK5Q6P3R8 708 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 FBXL19Q6PCT2 694 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 PLPP6Q8IY26 295 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 OR6K2Q8NGY2 324 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 HMCESQ96FZ2 354 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 EIF3CQ99613 913 aaKnown RBP14.05□□□□□ -0.16
PNKP-228ENST00000637325 HDAC8Q9BY41 377 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 TRIM7Q9C029 511 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 DMTF1Q9Y222 760 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 PCDHGB2Q9Y5G2 931 aa14.05□□□□□ -0.16
PNKP-228ENST00000637325 MAP1BP46821 2468 aaKnown RBP14.05□□□□□ -0.16
PNKP-228ENST00000637325 LRRK1Q38SD2 2015 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 A0A1W2PQU0 124 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 PRAMEF26H0Y7S4 382 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 H0Y8X5 98 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 KRIT1O00522 736 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 WNT9AO14904 365 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 FLRT2O43155 660 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 POP4O95707 220 aaKnown RBP14.04□□□□□ -0.16
PNKP-228ENST00000637325 GSRP00390 522 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 WNT1P04628 370 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 ITGB7P26010 798 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 CASP14P31944 242 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 TAS2R38P59533 333 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 FAM193AP78312 1265 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 RAD51Q06609 339 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 ZNF423Q2M1K9 1284 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 PPP6R3Q5H9R7 873 aaPredicted RBP14.04□□□□□ -0.16
PNKP-228ENST00000637325 HORMAD1Q86X24 394 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 UMODL1-AS1Q8N2C9 162 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 MFSD2AQ8NA29 543 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 OR2AP1Q8NGE2 309 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 RHBDD1Q8TEB9 315 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 CASKIN2Q8WXE0 1202 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 KLK6Q92876 244 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 PEBP4Q96S96 227 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 SNRNP25Q9BV90 132 aaKnown RBP14.04□□□□□ -0.16
PNKP-228ENST00000637325 NOL6Q9H6R4 1146 aaKnown RBP14.04□□□□□ -0.16
PNKP-228ENST00000637325 GDF3Q9NR23 364 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 ARHGAP20Q9P2F6 1191 aa14.04□□□□□ -0.16
PNKP-228ENST00000637325 A0A1W2PR77 199 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 ARHGAP42A6NI28 874 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 C10orf142B7Z368 130 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 TLR4O00206 839 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 RNF103O00237 685 aa14.03□□□□□ -0.16
PNKP-228ENST00000637325 SLC31A1O15431 190 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms