RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 K7ERQ8 282 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 KRIT1O00522 736 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 APOL1O14791 398 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 MID1O15344 667 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 SLC7A4O43246 635 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TMCC1O94876 653 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 EPN2O95208 641 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 SEMA4FO95754 770 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 IGLV3-19P01714 112 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CCDC175P0C221 793 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3HP0C7X1 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 C7P10643 843 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 XPAP23025 273 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 CES1P23141 567 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 IL4RP24394 825 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 NFKBIAP25963 317 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 HSPA9P38646 679 aaKnown RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 MAPK8P45983 427 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CSNK1DP48730 415 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 ARSEP51690 589 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CCNHP51946 323 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 COPS2P61201 443 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 ARF5P84085 180 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 NSUN2Q08J23 767 aaKnown RBP eCLIP8.36□□□□□ -1.07
PNKP-226ENST00000636840 MMRN1Q13201 1228 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 ZNF235Q14590 738 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 GSE1Q14687 1217 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 PAFAH1B3Q15102 231 aaKnown RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 ARSIQ5FYB1 569 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CFAP58Q5T655 872 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CCDC181Q5TID7 509 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 MARC1Q5VT66 337 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 LYSMD4Q5XG99 296 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3GQ6DHY5 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3CQ6IPX1 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 FBXL19Q6PCT2 694 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 LEKR1Q6ZMV7 388 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 DPY19L3Q6ZPD9 716 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 ASCL5Q7RTU5 278 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 PEX26Q7Z412 305 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CACUL1Q86Y37 369 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TMEM139Q8IV31 216 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CCDC50Q8IVM0 306 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3Q8IZP1 549 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 ATPAF2Q8N5M1 289 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 UBL4BQ8N7F7 174 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CCNYQ8ND76 341 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 OR2A12Q8NGT7 310 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 OR14C36Q8NHC7 312 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 PCDH19Q8TAB3 1148 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 RAPGEF5Q92565 580 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 PIGKQ92643 395 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 SKA1Q96BD8 255 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 RNF25Q96BH1 459 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 ZNF419Q96HQ0 510 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 PHOX2BQ99453 314 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 FERMT1Q9BQL6 677 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CINPQ9BW66 212 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 NUSAP1Q9BXS6 441 aaKnown RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 TM6SF2Q9BZW4 377 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 BRD8Q9H0E9 1235 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 NEUROG2Q9H2A3 272 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 ARRDC1-AS1Q9H2J1 176 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 NOL6Q9H6R4 1146 aaKnown RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 ZDHHC6Q9H6R6 413 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 VPS45Q9NRW7 570 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 PPM1HQ9ULR3 514 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 GUCA1BQ9UMX6 200 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 EP300Q09472 2414 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 FAM186AA6NE01 2351 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 SPAG17Q6Q759 2223 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 A0A1W2PP55 124 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 A0A1W2PQ67 120 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 BCLAF3A2AJT9 711 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 FAM47DPA6NHR8 397 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 METTL12A8MUP2 240 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 MIF4GDA9UHW6 222 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 PRR5-ARHGAP8B1AHC4 643 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 J3KR12 359 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 PPP1R12AO14974 1030 aaPredicted RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 KHNYNO15037 678 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 LEFTY1O75610 366 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 CD160O95971 181 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 CD48P09326 243 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 VAV1P15498 845 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 SDHBP21912 280 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 BCKDHBP21953 392 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 CCNCP24863 283 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 HOXD12P35452 270 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 NUDT1P36639 197 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 NR2C2P49116 596 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 RWDD2BP57060 319 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 POLR2LP62875 67 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 HNRNPDQ14103 355 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 LBRQ14739 615 aaKnown RBP8.35□□□□□ -1.07
PNKP-226ENST00000636840 PDK1Q15118 436 aa8.35□□□□□ -1.07
PNKP-226ENST00000636840 CYTH1Q15438 398 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms