RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 CYB5BO43169 146 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 CCNT2O60583 730 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 UBXN7O94888 489 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF157P51786 506 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 USP17L24Q0WX57 530 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RUNX2Q13950 521 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 LRRC41Q15345 812 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 YTHDF3Q7Z739 585 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PPIL6Q8IXY8 311 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 TMEM192Q8IY95 271 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 C12orf45Q8N5I9 185 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ADAM32Q8TC27 787 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 CXorf40BQ96DE9 158 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 USP28Q96RU2 1077 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 MGME1Q9BQP7 344 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PI4K2AQ9BTU6 479 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 DMGDHQ9UI17 866 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 COLEC10Q9Y6Z7 277 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 NCF1BA6NI72 391 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 NCF1CA8MVU1 366 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SLC16A3O15427 465 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RASGRP1O95267 797 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 TOP3BO95985 862 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 DNTTP04053 509 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PRKCBP05771 671 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 GSTT2BP0CG30 244 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 NCF1P14598 390 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 TCEA1P23193 301 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SERPINB5P36952 375 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RHOAP61586 193 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PPP2CAP67775 309 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 DRAP1Q14919 205 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SWSAP1Q6NVH7 229 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 COL26A1Q96A83 441 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 NUDT12Q9BQG2 462 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 BPIFA3Q9BQP9 254 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ALDH8A1Q9H2A2 487 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SPG21Q9NZD8 308 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 AP4E1Q9UPM8 1137 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RPS6KL1Q9Y6S9 549 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SPTBN2O15020 2390 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 KDM5DQ9BY66 1539 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 C17orf102A2RUQ5 167 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 H3BM21 787 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SSX4O60224 188 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 JAK2O60674 1132 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 FARP2O94887 1054 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 TXNP10599 105 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 CALB2P22676 271 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 MAMLD1Q13495 774 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 TKFCQ3LXA3 575 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 FAM91A1Q658Y4 838 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 AVL9Q8NBF6 648 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 TSEN15Q8WW01 171 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 NINJ1Q92982 152 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 HPDLQ96IR7 371 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RNPC3Q96LT9 517 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 COMMD4Q9H0A8 199 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 OPA3Q9H6K4 179 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 MRM3Q9HC36 420 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 KDM5CP41229 1560 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PCDHGA12O60330 932 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 GLRA3O75311 464 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 CSN2P05814 226 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 UGT2B15P54855 530 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 EEF1A1P68104 462 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 CHI3L2Q15782 390 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 EEF1A1P5Q5VTE0 462 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 FOXR2Q6PJQ5 311 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 IZUMO2Q6UXV1 221 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 UNC5CLQ8IV45 518 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 FNDC5Q8NAU1 212 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 C11orf65Q8NCR3 313 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 METTL6Q8TCB7 284 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SUSD6Q92537 303 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 BORCS8Q96FH0 119 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 KLHL5Q96PQ7 755 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ARHGAP9Q9BRR9 750 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 HIPK2Q9H2X6 1198 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ABHD10Q9NUJ1 306 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 MTRRQ9UBK8 725 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 EDC4Q6P2E9 1401 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 NEURL1BA8MQ27 555 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 M0R036 132 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ANGPTL7O43827 346 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 UGT2B11O75310 529 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SERPINF2P08697 491 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PNMA6AP0CW24 399 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 PET100P0DJ07 73 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 CETPP11597 493 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RPA3P35244 121 aaPredicted RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 RPL13AP40429 203 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 ASMTP46597 345 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 SEMA3AQ14563 771 aa6.08□□□□□ -1.44
SCN1A-212ENST00000636194 LARS2Q15031 903 aaKnown RBP6.08□□□□□ -1.44
SCN1A-212ENST00000636194 DCST1Q5T197 706 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms