RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PKN2Q16513 984 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 RBM20Q5T481 1227 aaKnown RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TTC22Q5TAA0 569 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 ARHGAP40Q5TG30 622 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 ICE2Q659A1 982 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 RGS7BPQ6MZT1 257 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 RINT1Q6NUQ1 792 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FBXO46Q6PJ61 603 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MOB2Q70IA6 237 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TICAM2Q86XR7 235 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 CERS5Q8N5B7 392 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TSPYL6Q8N831 410 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 SUN3Q8TAQ9 357 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 AFG1LQ8WV93 481 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 VCPIP1Q96JH7 1222 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 CAMK1GQ96NX5 476 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 HIST1H2AAQ96QV6 131 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 WDR24Q96S15 920 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 EYA3Q99504 573 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 SLC26A6Q9BXS9 759 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 G6PC2Q9NQR9 355 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 VPS45Q9NRW7 570 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 KLC4Q9NSK0 619 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 TMEM160Q9NX00 188 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 HYPKQ9NX55 129 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 SH3BP4Q9P0V3 963 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 C19orf53Q9UNZ5 99 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 SSX2IPQ9Y2D8 614 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 USP34Q70CQ2 3546 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FRMPD3Q5JV73 1810 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 FOCADQ5VW36 1801 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 BDP1A6H8Y1 2624 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 MAST2Q6P0Q8 1798 aa2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 COL2A1P02458 1487 aaPredicted RBP2.76□□□□□ -1.97
SMARCB1-208ENST00000634926 CDK5RAP2Q96SN8 1893 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PLXNB2O15031 1838 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CYP2D7A0A087X1C5 515 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CCDC196A0A1B0GTZ2 297 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 A6NLC8 198 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CBFA2T3O75081 653 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TAF5LO75529 589 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 GAS8-AS1O95177 125 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CD4P01730 458 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 EBLN1P0CF75 366 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 HGFP14210 728 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 EIF2S2P20042 333 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 RBL1P28749 1068 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 NPTX2P47972 431 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PDE6CP51160 858 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CCR5P51681 352 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 FKBP1AP62942 108 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 UBE3AQ05086 875 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CHRNDQ07001 517 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 AIMP1Q12904 312 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 FOXD4Q12950 439 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TRPC3Q13507 836 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TUBB3Q13509 450 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 ERV3-1Q14264 604 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CSHL1Q14406 222 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CLCA4Q14CN2 919 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 ACOX1Q15067 660 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CCDC152Q4G0S7 254 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PREPLQ4J6C6 727 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 MAP3K21Q5TCX8 1036 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 VPS53Q5VIR6 699 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 FAAH2Q6GMR7 532 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 C1orf122Q6ZSJ8 110 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 BBS12Q6ZW61 710 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 UBE2Q1Q7Z7E8 422 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TTC30AQ86WT1 665 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 ABRAQ8N0Z2 381 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TMEM57Q8N5G2 664 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 C8orf58Q8NAV2 365 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 USP38Q8NB14 1042 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PCYOX1LQ8NBM8 494 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CSGALNACT1Q8TDX6 532 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CPT1BQ92523 772 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 SNX19Q92543 992 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 HTRA1Q92743 480 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 HDAC2Q92769 488 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 DCPSQ96C86 337 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TWNKQ96RR1 684 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CTAGE1Q96RT6 745 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 C17orf80Q9BSJ5 609 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 MXD3Q9BW11 206 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 AMBRA1Q9C0C7 1298 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 COA1Q9GZY4 146 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PNNQ9H307 717 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PRO3102Q9H379 93 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 ELAC1Q9H777 363 aaKnown RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PRKRIP1Q9H875 184 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 JMJD4Q9H9V9 463 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 FSCN3Q9NQT6 498 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 RXFP3Q9NSD7 469 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 CWC25Q9NXE8 425 aaPredicted RBP2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 NDUFAF4Q9P032 175 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 PI4KBQ9UBF8 816 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 ZNF112Q9UJU3 913 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 USP22Q9UPT9 525 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 TTC28Q96AY4 2481 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms