RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PPP1R9BQ96SB3 815 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 PRMT1Q99873 361 aaKnown RBP15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 MYOCQ99972 504 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 NRSN2Q9GZP1 204 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 KDM4CQ9H3R0 1056 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 DEF6Q9H4E7 631 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 WDCPQ9H6R7 721 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 ABHD10Q9NUJ1 306 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 IGSF10Q6WRI0 2623 aa15.92■□□□□ 0.14
SNRNP48-203ENST00000634363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 A0A1B0GVM2 712 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 TCAF2A6NFQ2 919 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 SIGLEC16A6NMB1 481 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 C10orf142B7Z368 130 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 AKR1B15C9JRZ8 316 aaPredicted RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 SLC31A1O15431 190 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 PLRG1O43660 514 aaKnown RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 GJB6O95452 261 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 MYBL1P10243 752 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 GPD1P21695 349 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 PLK1P53350 603 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 ADKP55263 362 aaKnown RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 OXCT1P55809 520 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 ATP11AP98196 1134 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 C19orf57Q0VDD7 668 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 ZNF177Q13360 481 aaPredicted RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 RTP5Q14D33 572 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 CDO1Q16878 200 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 SETMARQ53H47 684 aaPredicted RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 BRMS1LQ5PSV4 323 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 OTUD1Q5VV17 481 aaPredicted RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 CXorf57Q6NSI4 855 aaKnown RBP15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 TRNP1Q6NT89 227 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 FBXL22Q6P050 247 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 KDM7AQ6ZMT4 941 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 Q6ZVU0 165 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 JOSD2Q8TAC2 188 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 SLC39A7Q92504 469 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 NT5C3BQ969T7 300 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 ZNF653Q96CK0 615 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 MCEEQ96PE7 176 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 FEM1AQ9BSK4 669 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 SIK2Q9H0K1 926 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 PIGVQ9NUD9 493 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 PARVAQ9NVD7 372 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 VANGL2Q9ULK5 521 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 CLCA2Q9UQC9 943 aa15.91■□□□□ 0.14
SNRNP48-203ENST00000634363 ARID1BQ8NFD5 2236 aaPredicted RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 C2CD4BA6NLJ0 364 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 C1QTNF3-AMACRE9PGA6 284 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 PRAMEF26H0Y7S4 382 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 SLC7A4O43246 635 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 ATMINO43313 823 aaPredicted RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 SIGLEC6O43699 453 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 TFE3P19532 575 aaPredicted RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 RFC1P35251 1148 aaPredicted RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 GGCXP38435 758 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 PTPN9P43378 593 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 DAB2P98082 770 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 ILKQ13418 452 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 HS1BP3Q53T59 392 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 TTC39BQ5VTQ0 682 aaPredicted RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 KANSL1Q7Z3B3 1105 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 IQCHQ86VS3 1027 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 OR52K2Q8NGK3 314 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 FGF11Q92914 225 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 FCRL3Q96P31 734 aaPredicted RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 TKTL2Q9H0I9 626 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 MUC3BQ9H195 1237 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 ISCUQ9H1K1 167 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 CNOT8Q9UFF9 292 aaKnown RBP15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 VPS28Q9UK41 221 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 PPM1HQ9ULR3 514 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 DMTF1Q9Y222 760 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 SCINQ9Y6U3 715 aa15.9■□□□□ 0.14
SNRNP48-203ENST00000634363 A0A087X0T9 212 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 TRIM38O00635 465 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 MCF2LO15068 1137 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 FFAR2O15552 330 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 ATP9BO43861 1147 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 BRINP1O60477 761 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 RNGTTO60942 597 aaKnown RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 FAM228BP0C875 321 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 PRLRP16471 622 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 NUDT1P36639 197 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 EIF4A3P38919 411 aaKnown RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 CXCR3P49682 368 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 IRAK1P51617 712 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 INSM1Q01101 510 aaPredicted RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 OVGP1Q12889 678 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 TBX2Q13207 712 aaPredicted RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 AUHQ13825 339 aaKnown RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 C15orf59Q2T9L4 293 aaPredicted RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 CCDC14Q49A88 953 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 AGBL4Q5VU57 503 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 ALKBH5Q6P6C2 394 aaKnown RBP15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 WDR59Q6PJI9 974 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 STRADAQ7RTN6 431 aa15.89■□□□□ 0.13
SNRNP48-203ENST00000634363 TRIM69Q86WT6 500 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms