RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 GSTM4Q03013 218 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SF1Q15637 639 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ASIC2Q16515 512 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TDRD12Q587J7 1177 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 IRF2BP2Q7Z5L9 587 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MYCBPAPQ8TBZ2 947 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MDM1Q8TC05 714 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 WBP2Q969T9 261 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SELENOOQ9BVL4 669 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SEL1LQ9UBV2 794 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ARMCX3Q9UH62 379 aaPredicted RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TNPO3Q9Y5L0 923 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 STYXL1Q9Y6J8 313 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 EML5Q05BV3 1969 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 AGPSO00116 658 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TGFB1I1O43294 461 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MAN1A2O60476 641 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 DLX3O60479 287 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 AFPP02771 609 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 NR3C1P04150 777 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 UCHL3P15374 230 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GABRG2P18507 467 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 PON1P27169 355 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ADORA2BP29275 332 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ACAP1Q15027 740 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SNRNP35Q16560 246 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 HECTD3Q5T447 861 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ACOT1Q86TX2 421 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 RASSF3Q86WH2 238 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ZCCHC9Q8N567 271 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 B3GALNT2Q8NCR0 500 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 NANOS1Q8WY41 292 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SLC35C1Q96A29 364 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 LRIG1Q96JA1 1093 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CRACR2AQ9BSW2 395 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SMYD3Q9H7B4 428 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GDAP2Q9NXN4 497 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 RNF14Q9UBS8 474 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 AJAP1Q9UKB5 411 aaPredicted RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GRID2IPA4D2P6 1211 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ERICH4A6NGS2 130 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CES2O00748 559 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TLR5O60602 858 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 EXOC3O60645 756 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 RASGRP1O95267 797 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CCDC130P13994 396 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SCP2P22307 547 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 KIR2DL1P43626 348 aaPredicted RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SLC5A3P53794 718 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 MAP3K7CLP57077 242 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GAD2Q05329 585 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 KLHL30Q0D2K2 578 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SCAPQ12770 1279 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 RAPGEF1Q13905 1077 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SLBPQ14493 270 aaKnown RBP eCLIP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TRIP6Q15654 476 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 DUOXA1Q1HG43 343 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GAB4Q2WGN9 574 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 INAVAQ3KP66 663 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 FAM171BQ6P995 826 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ABHD17CQ6PCB6 329 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF571Q7Z3V5 609 aaPredicted RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GSPT2Q8IYD1 628 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 NUP93Q8N1F7 819 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TERB1Q8NA31 727 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GATA6Q92908 595 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CAVIN3Q969G5 261 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 PKMYT1Q99640 499 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 LRRC1Q9BTT6 524 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 GPR174Q9BXC1 333 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 CIPCQ9C0C6 399 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ELOVL4Q9GZR5 314 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 LUC7LQ9NQ29 371 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 SMARCAL1Q9NZC9 954 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 EHD2Q9NZN4 543 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 VPS18Q9P253 973 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TBC1D14Q9P2M4 693 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 TLN1Q9Y490 2541 aaKnown RBP5.01□□□□□ -1.61
LINC00550-201ENST00000629293 ADAMTS9Q9P2N4 1935 aa5.01□□□□□ -1.61
LINC00550-201ENST00000629293 COL4A2P08572 1712 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 LOC100289279A0A1B0GTE1 492 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 FAM47DPA6NHR8 397 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 BUB1O43683 1085 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PALMO75781 387 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SLC9A1P19634 815 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ACO1P21399 889 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 NTSR1P30989 418 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 MAGEA11P43364 429 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 PIN1Q13526 163 aaPredicted RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 BYSLQ13895 437 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 STAT4Q14765 748 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 ZNF699Q32M78 642 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 GLE1Q53GS7 698 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 GRAMD4Q6IC98 578 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 LRRC57Q8N9N7 239 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 IPO4Q8TEX9 1081 aaKnown RBP5□□□□□ -1.61
LINC00550-201ENST00000629293 HVCN1Q96D96 273 aa5□□□□□ -1.61
LINC00550-201ENST00000629293 SH3GL2Q99962 352 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms