RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TPSB2P20231 275 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 CCNCP24863 283 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 FDFT1P37268 417 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 PAPOLAP51003 745 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 EPHA5P54756 1037 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 GPX6P59796 221 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 PDIA2Q13087 525 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TPSAB1Q15661 275 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TEX44Q53QW1 395 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 CEP85LQ5SZL2 805 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 Q6ZNB5 142 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 LRRC49Q8IUZ0 686 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 KLHDC8BQ8IXV7 354 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 AZIN2Q96A70 460 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 HMCESQ96FZ2 354 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MSANTD3Q96H12 275 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 GCNAQ96QF7 691 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 VAT1Q99536 393 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TRMT61BQ9BVS5 477 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 BRD9Q9H8M2 597 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TMBIM4Q9HC24 238 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 PRMT8Q9NR22 394 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 ASAH2Q9NR71 780 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 KLHL8Q9P2G9 620 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 STOML2Q9UJZ1 356 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MTF2Q9Y483 593 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TEX264Q9Y6I9 313 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 NUP210Q8TEM1 1887 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 A0A1W2PRU2 124 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MED19A0JLT2 244 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TRDMT1O14717 391 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 SCAMP3O14828 347 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 EIF3HO15372 352 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 CACNG3O60359 315 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 IRF1P10914 325 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 HDCP19113 662 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TARSP26639 723 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 CDC25CP30307 473 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 NDST2P52849 883 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 GYS2P54840 703 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 RPS24P62847 133 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 IFI35P80217 286 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 CBX1P83916 185 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 OLIG2Q13516 323 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 PARP6Q2NL67 630 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 KCTD11Q693B1 232 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TANGO2Q6ICL3 276 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TIGD7Q6NT04 549 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 PID1Q7Z2X4 250 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 ANKMY2Q8IV38 441 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 ZBED8Q8IZ13 594 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 LGI2Q8N0V4 545 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 CELF5Q8N6W0 485 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MCUQ8NE86 351 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 RIN3Q8TB24 985 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 EPS8L3Q8TE67 593 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TCEAL4Q96EI5 215 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TEKT5Q96M29 485 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TTC25Q96NG3 672 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 IL12RB2Q99665 862 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 RTKNQ9BST9 563 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 MLPHQ9BV36 600 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TMEM109Q9BVC6 243 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 ATXN3LQ9H3M9 355 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 GMEB2Q9UKD1 530 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 TRHDEQ9UKU6 1024 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 RAB23Q9ULC3 237 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 BPTFQ12830 3046 aa9.68□□□□□ -0.86
PDLIM5-223ENST00000627587 ANKRD36A6QL64 1941 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 MYO15AQ9UKN7 3530 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 ARHGAP42A6NI28 874 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 RASA4BC9J798 803 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 J3KR12 359 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 RASA4O43374 803 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 RRP9O43818 475 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 FOXD2O60548 495 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 LRP3O75074 770 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 JCHAINP01591 159 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 C1QAP02745 245 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 MYZAPP0CAP1 466 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 CCNB1P14635 433 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 GCAP28676 217 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 MAPKAPK2P49137 400 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 LMAN1P49257 510 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 CCR3P51677 355 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 SARNPP82979 210 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 IHHQ14623 411 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 SLC5A9Q2M3M2 681 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 TNFAIP8L3Q5GJ75 292 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 PRSS36Q5K4E3 855 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 RABGAP1LQ5R372 815 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 ADGRF1Q5T601 910 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 ITPRIPL1Q6GPH6 555 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 FAM217AQ8IXS0 508 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 SH2D3CQ8N5H7 860 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 MAB21L3Q8N8X9 362 aa9.67□□□□□ -0.86
PDLIM5-223ENST00000627587 ST13P5Q8NFI4 369 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms