RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.05■□□□□ 0.32
UBE3D-208ENST00000626828 ACTL7AQ9Y615 435 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 CABIN1Q9Y6J0 2220 aa17.05■□□□□ 0.32
UBE3D-208ENST00000626828 ATXN2Q99700 1313 aaKnown RBP17.04■□□□□ 0.32
UBE3D-208ENST00000626828 KPNA3O00505 521 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-208ENST00000626828 SLC30A4O14863 429 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 GSRP00390 522 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 CTSLP07711 333 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 AMPD1P23109 780 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 MAN1A1P33908 653 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 CYLC1P35663 651 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-208ENST00000626828 PAPOLAP51003 745 aaKnown RBP17.04■□□□□ 0.32
UBE3D-208ENST00000626828 CCR5P51681 352 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 RAD51Q06609 339 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 CNTN1Q12860 1018 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 DPYSQ14117 519 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 KRT81Q14533 505 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 MESDQ14696 234 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 TCEAL1Q15170 157 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 MYLK3Q32MK0 819 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 STPG1Q5TH74 334 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 TXNRD3NBQ6F5E7 133 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 NCEH1Q6PIU2 408 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 LEKR1Q6ZMV7 388 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 TMTC1Q8IUR5 882 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 OR2AP1Q8NGE2 309 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 CELF6Q96J87 481 aaKnown RBP17.04■□□□□ 0.32
UBE3D-208ENST00000626828 CAPN10Q9HC96 672 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 PCDH18Q9HCL0 1135 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 DYRK4Q9NR20 520 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 RXFP3Q9NSD7 469 aa17.04■□□□□ 0.32
UBE3D-208ENST00000626828 RCOR3Q9P2K3 495 aaPredicted RBP17.04■□□□□ 0.32
UBE3D-208ENST00000626828 ASCC3Q8N3C0 2202 aaKnown RBP17.03■□□□□ 0.32
UBE3D-208ENST00000626828 LNP1A1A4G5 178 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 BCAT2O15382 392 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-208ENST00000626828 LEFTY1O75610 366 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 MTA2O94776 668 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 LCA5LO95447 670 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 SYPP08247 313 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 KRT7P08729 469 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 CD27P26842 260 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 CCNHP51946 323 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-208ENST00000626828 METAP1P53582 386 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 CDH6P55285 790 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 PDK2Q15119 407 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 SPA17Q15506 151 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 RYBPQ8N488 228 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-208ENST00000626828 KCTD6Q8NC69 237 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 C1orf216Q8TAB5 229 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 RFFLQ8WZ73 363 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 SNX19Q92543 992 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 PPP1R16AQ96I34 528 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 CSPG4P5Q96PW8 444 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 EDEM2Q9BV94 578 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 HDAC8Q9BY41 377 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 LUC7LQ9NQ29 371 aaKnown RBP17.03■□□□□ 0.32
UBE3D-208ENST00000626828 TMEM9BQ9NQ34 198 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 UBA2Q9UBT2 640 aaPredicted RBP17.03■□□□□ 0.32
UBE3D-208ENST00000626828 WASF2Q9Y6W5 498 aa17.03■□□□□ 0.32
UBE3D-208ENST00000626828 PCNX2A6NKB5 2137 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 NYNRINQ9P2P1 1898 aaKnown RBP17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ARHGAP33O14559 1287 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 PLRG1O43660 514 aaKnown RBP17.02■□□□□ 0.32
UBE3D-208ENST00000626828 PRAMEF11O60813 436 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 TMCC1O94876 653 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ENGP17813 658 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ATXN3P54252 364 aaPredicted RBP17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ADPRHP54922 357 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 RHOAP61586 193 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 CYTH1Q15438 398 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 POM121L1PQ3SYA9 428 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ATP13A4Q4VNC1 1196 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 TMCO3Q6UWJ1 677 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ERN2Q76MJ5 926 aaKnown RBP17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ARHGAP12Q8IWW6 846 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 TSC1Q92574 1164 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 ARRDC3Q96B67 414 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 TM6SF2Q9BZW4 377 aa17.02■□□□□ 0.32
UBE3D-208ENST00000626828 EPN1Q9Y6I3 576 aaPredicted RBP17.02■□□□□ 0.32
UBE3D-208ENST00000626828 DOCK9Q9BZ29 2069 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 A0A1W2PPC4 97 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 C4orf47A7E2U8 309 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 TMEM110-MUSTN1A8MSY1 372 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 C10orf142B7Z368 130 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 J3KR12 359 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 DFFAO00273 331 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 PLK4O00444 970 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 CDX4O14627 284 aaPredicted RBP17.01■□□□□ 0.31
UBE3D-208ENST00000626828 IGHV4-34P06331 123 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 IL4RP24394 825 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 SLC1A1P43005 524 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 ARSEP51690 589 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 IL10RBQ08334 325 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 AGBL4Q5VU57 503 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 NEK5Q6P3R8 708 aa17.01■□□□□ 0.31
UBE3D-208ENST00000626828 PRPF39Q86UA1 669 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms