RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 FSCN3Q9NQT6 498 aa22.77■■□□□ 1.24
SF1-220ENST00000626028 ZNHIT6Q9NWK9 470 aaKnown RBP22.77■■□□□ 1.24
SF1-220ENST00000626028 PCDHGB2Q9Y5G2 931 aa22.77■■□□□ 1.24
SF1-220ENST00000626028 SSU72P8A0A1W2PR75 194 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 KPNA3O00505 521 aaPredicted RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 ITGB7P26010 798 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 CSNK1EP49674 416 aaKnown RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 NOVA1P51513 510 aaKnown RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 METAP1P53582 386 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 SNRPD1P62314 119 aaKnown RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 PIP5KL1Q5T9C9 394 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 CYP4V2Q6ZWL3 525 aaPredicted RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 ERN2Q76MJ5 926 aaKnown RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 PRPF39Q86UA1 669 aaKnown RBP22.76■■□□□ 1.23
SF1-220ENST00000626028 DNAAF5Q86Y56 855 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 VSTM4Q8IW00 320 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 OR2AP1Q8NGE2 309 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 PEBP4Q96S96 227 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 OSBPL1AQ9BXW6 950 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 TNKS2Q9H2K2 1166 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 PCSK1NQ9UHG2 260 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 IP6K2Q9UHH9 426 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 NENFQ9UMX5 172 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 ANKRD36A6QL64 1941 aa22.76■■□□□ 1.23
SF1-220ENST00000626028 RASA4BC9J798 803 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 EEF2KO00418 725 aaKnown RBP22.75■■□□□ 1.23
SF1-220ENST00000626028 RASA4O43374 803 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 LEFTY1O75610 366 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 CCNHP51946 323 aaPredicted RBP22.75■■□□□ 1.23
SF1-220ENST00000626028 MAPK8IP2Q13387 824 aaPredicted RBP22.75■■□□□ 1.23
SF1-220ENST00000626028 SLC18A3Q16572 532 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 SLC45A4Q5BKX6 768 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 ARSIQ5FYB1 569 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 CCDC122Q5T0U0 273 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 PSAPL1Q6NUJ1 521 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 RFX8Q6ZV50 586 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 CHST14Q8NCH0 376 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 LRRC19Q9H756 370 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 ZWILCHQ9H900 591 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 ANKRD6Q9Y2G4 727 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 FCF1Q9Y324 198 aaKnown RBP22.75■■□□□ 1.23
SF1-220ENST00000626028 WASF2Q9Y6W5 498 aa22.75■■□□□ 1.23
SF1-220ENST00000626028 BUB1O43683 1085 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 RNGTTO60942 597 aaKnown RBP22.74■■□□□ 1.23
SF1-220ENST00000626028 POP4O95707 220 aaKnown RBP22.74■■□□□ 1.23
SF1-220ENST00000626028 CD59P13987 128 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 BNC1Q01954 994 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 OVGP1Q12889 678 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 DPYSL2Q16555 572 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 HLA-BQ31612 363 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 SETMARQ53H47 684 aaPredicted RBP22.74■■□□□ 1.23
SF1-220ENST00000626028 SARM1Q6SZW1 724 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 ADAT2Q7Z6V5 191 aaKnown RBP22.74■■□□□ 1.23
SF1-220ENST00000626028 IQCHQ86VS3 1027 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 LZTR1Q8N653 840 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 TEKT4Q8WW24 435 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 RAB7BQ96AH8 199 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 HMCESQ96FZ2 354 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 GAREM1Q9H706 876 aa22.74■■□□□ 1.23
SF1-220ENST00000626028 A0A1B0GVT2 93 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 ARHGAP42A6NI28 874 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 MYO1FO00160 1098 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 DAPK3O43293 454 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 AP1G1O43747 822 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 CD38P28907 300 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 NEK3P51956 506 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 TAS2R38P59533 333 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 RAD51Q06609 339 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 NAPEPLDQ6IQ20 393 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 ZNF354CQ86Y25 554 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 RNF214Q8ND24 703 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 GRIN3AQ8TCU5 1115 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 ARRDC3Q96B67 414 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 GDAP1L1Q96MZ0 367 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 NUP85Q9BW27 656 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 UVRAGQ9P2Y5 699 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 ANAPC7Q9UJX3 599 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 MFHAS1Q9Y4C4 1052 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 SLCO1B1Q9Y6L6 691 aa22.73■■□□□ 1.23
SF1-220ENST00000626028 MAGEC1O60732 1142 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 EIF4A3P38919 411 aaKnown RBP22.72■■□□□ 1.23
SF1-220ENST00000626028 CTSKP43235 329 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 DNA2P51530 1060 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 C21orf59P57076 290 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 GRM3Q14832 879 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 CA9Q16790 459 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 KIF19Q2TAC6 998 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 ASTE1Q2TB18 679 aaPredicted RBP22.72■■□□□ 1.23
SF1-220ENST00000626028 PPP6R3Q5H9R7 873 aaPredicted RBP22.72■■□□□ 1.23
SF1-220ENST00000626028 N4BP2L1Q5TBK1 243 aaPredicted RBP22.72■■□□□ 1.23
SF1-220ENST00000626028 AFMIDQ63HM1 303 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 DBX2Q6ZNG2 339 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 MFSD2AQ8NA29 543 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 SERAC1Q96JX3 654 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 EBF2Q9HAK2 575 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 TM7SF3Q9NS93 570 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 ABHD10Q9NUJ1 306 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 GPATCH2LQ9NWQ4 482 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 SHROOM3Q8TF72 1996 aa22.72■■□□□ 1.23
SF1-220ENST00000626028 PRAMEF26H0Y7S4 382 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms