RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ERCC2P18074 760 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 GLDCP23378 1020 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 IL1R2P27930 398 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ACVRL1P37023 503 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SLC1A1P43005 524 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 DHPSP49366 369 aaPredicted RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 MRE11P49959 708 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SERPINH1P50454 418 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 VAV2P52735 878 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 YBEYP58557 167 aaPredicted RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 RPL6Q02878 288 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SLC25A11Q02978 314 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ELAVL3Q14576 367 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 PDK2Q15119 407 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 DLG2Q15700 870 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 DPYSL2Q16555 572 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 CFAP58Q5T655 872 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 FAM46CQ5VWP2 391 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 LAIR1Q6GTX8 287 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 C22orf39Q6P5X5 142 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 RAD9BQ6WBX8 426 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SLC36A4Q6YBV0 504 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 LEKR1Q6ZMV7 388 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ARMCX6Q7L4S7 300 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 NLRP14Q86W24 1093 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 RASSF3Q86WH2 238 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 MMAAQ8IVH4 418 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 CCDC50Q8IVM0 306 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 RHOT1Q8IXI2 618 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 STK40Q8N2I9 435 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SH2D3CQ8N5H7 860 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ATPAF2Q8N5M1 289 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ARFGAP1Q8N6T3 406 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 KDM1BQ8NB78 822 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 GRIN3AQ8TCU5 1115 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 NSMCE1Q8WV22 266 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SNX19Q92543 992 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ARHGEF2Q92974 986 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 HMCESQ96FZ2 354 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 CELF6Q96J87 481 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 LMLNQ96KR4 655 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ZNF830Q96NB3 372 aaPredicted RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 PSMB7Q99436 277 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 OMDQ99983 421 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 DESI2Q9BSY9 194 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 MAK16Q9BXY0 300 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 TM6SF2Q9BZW4 377 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 MKRN2Q9H000 416 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 TNKS2Q9H2K2 1166 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 PCDH18Q9HCL0 1135 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 PRSS16Q9NQE7 514 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ENAMQ9NRM1 1142 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 CWC15Q9P013 229 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 SLCO3A1Q9UIG8 710 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 HCN2Q9UL51 889 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 TFR2Q9UP52 801 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 NCOR1O75376 2440 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 DOCK4Q8N1I0 1966 aa7.37□□□□□ -1.23
NPLOC4-221ENST00000625705 ZNF318Q5VUA4 2279 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 A0A0A6YYK5 440 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 PRR23AA6NEV1 266 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 K7ERQ8 282 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 KPNA3O00505 521 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 DCLK1O15075 740 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 BUB1BO60566 1050 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 LILRB5O75023 590 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 RNASEH2AO75792 299 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 MTA2O94776 668 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 LCA5LO95447 670 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 IGSF6O95976 241 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 THBS1P07996 1170 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 SRCP12931 536 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 VAV1P15498 845 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 MX2P20592 715 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 COMTP21964 271 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 AMPD1P23109 780 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 CD6P30203 668 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 OXTRP30559 389 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 CETN2P41208 172 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 P2RY2P41231 377 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 HCAR3P49019 387 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 NDST2P52849 883 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 TAS2R40P59535 323 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 RHOAP61586 193 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 SNRPD1P62314 119 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 CREB5Q02930 508 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 ZBTB16Q05516 673 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 RAD51Q06609 339 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 SLC20A2Q08357 652 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 SEMA3BQ13214 749 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 ENPP2Q13822 863 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 CST6Q15828 149 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 POM121L1PQ3SYA9 428 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 CCDC181Q5TID7 509 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 TXNRD3NBQ6F5E7 133 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 CYP4V2Q6ZWL3 525 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 POLNQ7Z5Q5 900 aa7.36□□□□□ -1.23
NPLOC4-221ENST00000625705 KBTBD6Q86V97 674 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms