RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 MFHAS1Q9Y4C4 1052 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 WASF2Q9Y6W5 498 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 SHROOM3Q8TF72 1996 aa12.68□□□□□ -0.38
LINC00963-217ENST00000624009 TDRD6O60522 2096 aaKnown RBP12.68□□□□□ -0.38
LINC00963-217ENST00000624009 USP24Q9UPU5 2620 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3DA0A087WVF3 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3IA0A087WXS9 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 A0A087X0T9 212 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3EA0A087X179 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3KA0A087X1G2 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3FA6NER0 549 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3LB9A6J9 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 RASA4BC9J798 803 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 RASA4O43374 803 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 AP1G1O43747 822 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 CREB3O43889 395 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 POP4O95707 220 aaKnown RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3HP0C7X1 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 FAM228BP0C875 321 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 ACVRL1P37023 503 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 MAPK8P45983 427 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 SHC2P98077 582 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 GRM3Q14832 879 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 NFKBIBQ15653 356 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 SLC18A3Q16572 532 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 SLC45A4Q5BKX6 768 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 PIP5KL1Q5T9C9 394 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3GQ6DHY5 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3CQ6IPX1 549 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 SARM1Q6SZW1 724 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 ERN2Q76MJ5 926 aaKnown RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 PRPF39Q86UA1 669 aaKnown RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 TBC1D3Q8IZP1 549 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 LZTR1Q8N653 840 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 OR2AP1Q8NGE2 309 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 FAM174AQ8TBP5 190 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 CPLX3Q8WVH0 158 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 RAB7BQ96AH8 199 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 SNRNP25Q9BV90 132 aaKnown RBP12.67□□□□□ -0.38
LINC00963-217ENST00000624009 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 LRRC19Q9H756 370 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 ZWILCHQ9H900 591 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 UVRAGQ9P2Y5 699 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 ANKRD6Q9Y2G4 727 aa12.67□□□□□ -0.38
LINC00963-217ENST00000624009 SPEGQ15772 3267 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 ARHGAP42A6NI28 874 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 MYO1FO00160 1098 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 YKT6O15498 198 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 PCDHGA12O60330 932 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 MAGEC1O60732 1142 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 LEFTY1O75610 366 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 CD59P13987 128 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 CTSKP43235 329 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 CSNK1EP49674 416 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 SUOXP51687 545 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 NEK3P51956 506 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 BNC1Q01954 994 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 SUZ12Q15022 739 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 ZNF423Q2M1K9 1284 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 ASTE1Q2TB18 679 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 HLA-BQ31612 363 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 UAP1L1Q3KQV9 507 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 SETMARQ53H47 684 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 TMCO4Q5TGY1 634 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 AFMIDQ63HM1 303 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 NAPEPLDQ6IQ20 393 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 RFX8Q6ZV50 586 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 CNGA4Q8IV77 575 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 HCAR2Q8TDS4 363 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 ARHGEF26Q96DR7 871 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 GDAP1L1Q96MZ0 367 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 PEBP4Q96S96 227 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 CPEB1Q9BZB8 566 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 THAP2Q9H0W7 228 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 ERVMER34-1Q9H9K5 563 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 RCOR3Q9P2K3 495 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 COL5A1P20908 1838 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-217ENST00000624009 LRRK1Q38SD2 2015 aa12.66□□□□□ -0.38
LINC00963-217ENST00000624009 FRYQ5TBA9 3013 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 A0A1B0GVT2 93 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 A0A1W2PR77 199 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 FAM47DPA6NHR8 397 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 KPNA3O00505 521 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-217ENST00000624009 FLRT2O43155 660 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 PRAMEF11O60813 436 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 CD38P28907 300 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 NUMBP49757 651 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 METAP1P53582 386 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 TAS2R38P59533 333 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 RAD51Q06609 339 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 DPYSQ14117 519 aa12.65□□□□□ -0.38
LINC00963-217ENST00000624009 RFTN1Q14699 578 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms